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The map label for this gene is iolB [H]

Identifier: 16767666

GI number: 16767666

Start: 4663106

End: 4663915

Strand: Reverse

Name: iolB [H]

Synonym: STM4420

Alternate gene names: 16767666

Gene position: 4663915-4663106 (Counterclockwise)

Preceding gene: 16767667

Following gene: 16767664

Centisome position: 96.02

GC content: 55.19

Gene sequence:

>810_bases
ATGGCCAACTTGCTGAGTACCTGTACCTCTGAGTCGGGAAATATCCAACACATTTCCCCTCAAAATGCAGGCTGGGAGTA
TGTCGGTTTTGATGTCTGGCAGTTGAAGGCTGGAGAGTCGATAACCCTGCCGTCCGATGAGCGTGAACGCTGTCTGGTGC
TGGTTGCCGGGCTGGCCAGCGTTAAGGCCGCCGACAGTTTTTTCTATCGGATTGGTCAGCGCATGAGTCCGTTTGAACGC
ATTCCGGCTTATTCGGTTTACCTCCCCCATCATACGGAGGCGAAAGTGACAGCCGAAACCGACCTTGAGCTGGCCGTATG
CAGCGCGCCGGGATTCGGAGAGCTTCCGGTACGTCTGATCTCGCCACAAGAGGTCGGGGTAGAGCATCGGGGAAAAGGGC
GCAATCAGCGCCTGGTGCATAACATCCTTCCTGATAGCCAGCTCGCCGACAGCCTGCTAGTCGTTGAAGTGTACACTAAT
GAAGGCGATACCAGCTCCTGGCCCGCGCACAAGCACGATACGGCAGTTGAAGGCCAGGAGACCTATCTGGAAGAGACGTA
CTATCACCGTTTCAATCCACCTCAGGGATTCTGCTTACAGCGCGTCTACACCGACGATCGCAGCCTGGATGAATGTATGG
CGGTCTATAACCGGGATGTAGTGAAAGTACCTAAGGGCTACCACCCGGTTGCCACCATCGCGGGTTACGATAACTACTAT
CTGAACGTGATGGCCGGCCCGCTACGAAAATGGCGTTTCACCTGGGAAGAGAACCACGCGTGGATTAACTCACCAGACTA
CCCGCGATAA

Upstream 100 bases:

>100_bases
GATGAAAACCGTTACCTCGCGTTGGCCGAACGGACAGCAGATCGTATCGGAGTTCAGTATGCCGACTCTCGGTTAATACG
CTTTCAGGAAGGAGAAGATT

Downstream 100 bases:

>100_bases
CACTTCGTTGAGTGGTACTTTGCCAGCCGTCCTCTGCGGCTGGCTTTTTTATTCAACTCTGCGCCACACACGCTCATAAG
ATCGCTATCCGCCTTCTCTT

Product: inner membrane protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MANLLSTCTSESGNIQHISPQNAGWEYVGFDVWQLKAGESITLPSDERERCLVLVAGLASVKAADSFFYRIGQRMSPFER
IPAYSVYLPHHTEAKVTAETDLELAVCSAPGFGELPVRLISPQEVGVEHRGKGRNQRLVHNILPDSQLADSLLVVEVYTN
EGDTSSWPAHKHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVKVPKGYHPVATIAGYDNYY
LNVMAGPLRKWRFTWEENHAWINSPDYPR

Sequences:

>Translated_269_residues
MANLLSTCTSESGNIQHISPQNAGWEYVGFDVWQLKAGESITLPSDERERCLVLVAGLASVKAADSFFYRIGQRMSPFER
IPAYSVYLPHHTEAKVTAETDLELAVCSAPGFGELPVRLISPQEVGVEHRGKGRNQRLVHNILPDSQLADSLLVVEVYTN
EGDTSSWPAHKHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVKVPKGYHPVATIAGYDNYY
LNVMAGPLRKWRFTWEENHAWINSPDYPR
>Mature_268_residues
ANLLSTCTSESGNIQHISPQNAGWEYVGFDVWQLKAGESITLPSDERERCLVLVAGLASVKAADSFFYRIGQRMSPFERI
PAYSVYLPHHTEAKVTAETDLELAVCSAPGFGELPVRLISPQEVGVEHRGKGRNQRLVHNILPDSQLADSLLVVEVYTNE
GDTSSWPAHKHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVKVPKGYHPVATIAGYDNYYL
NVMAGPLRKWRFTWEENHAWINSPDYPR

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 30483; Mature: 30352

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLLSTCTSESGNIQHISPQNAGWEYVGFDVWQLKAGESITLPSDERERCLVLVAGLAS
CCCHHHHHCCCCCCEEEECCCCCCCEEECEEEEEEECCCEEECCCCCCCEEEEEEECHHH
VKAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAKVTAETDLELAVCSAPGFGELPVRLI
HHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCEEEE
SPQEVGVEHRGKGRNQRLVHNILPDSQLADSLLVVEVYTNEGDTSSWPAHKHDTAVEGQE
CHHHCCCCCCCCCCCHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHH
TYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVKVPKGYHPVATIAGYDNYY
HHHHHHHHHCCCCCCCCEEHHHHCCCCCHHHHHHHHCCCEEECCCCCCCEEEEECCCCEE
LNVMAGPLRKWRFTWEENHAWINSPDYPR
EEEEECCCCCEEEEEECCCEEECCCCCCC
>Mature Secondary Structure 
ANLLSTCTSESGNIQHISPQNAGWEYVGFDVWQLKAGESITLPSDERERCLVLVAGLAS
CCHHHHHCCCCCCEEEECCCCCCCEEECEEEEEEECCCEEECCCCCCCEEEEEEECHHH
VKAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAKVTAETDLELAVCSAPGFGELPVRLI
HHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCEEEE
SPQEVGVEHRGKGRNQRLVHNILPDSQLADSLLVVEVYTNEGDTSSWPAHKHDTAVEGQE
CHHHCCCCCCCCCCCHHHHHHCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHH
TYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVKVPKGYHPVATIAGYDNYY
HHHHHHHHHCCCCCCCCEEHHHHCCCCCHHHHHHHHCCCEEECCCCCCCEEEEECCCCEE
LNVMAGPLRKWRFTWEENHAWINSPDYPR
EEEEECCCCCEEEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA