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The map label for this gene is ytfF [H]

Identifier: 16767646

GI number: 16767646

Start: 4637134

End: 4638099

Strand: Reverse

Name: ytfF [H]

Synonym: STM4400

Alternate gene names: 16767646

Gene position: 4638099-4637134 (Counterclockwise)

Preceding gene: 16767647

Following gene: 16767645

Centisome position: 95.48

GC content: 58.49

Gene sequence:

>966_bases
ATGATTAGCGGCGTGCTATACGCCCTGCTGGCAGGGCTAATGTGGGGATTGATTTTCGTCGGCCCGTTAATCGTGCCGGA
TTACCCGGCCCTCTTACAGTCAATGGGACGCTATCTGGCGCTGGGGCTGATTGCCCTGCCGATTGCCTGGTTAGGCCGCA
CGCGGTTACGCCAGTTAACGCGCAAAGACTGGTCCACCGCCCTGTCGCTGACCCTGATGGGCAATGTAATCTATTACGCC
TGCCTCGCCAGCGCCATTCAGCGAACCGGCGCGCCGGTGTCGACGATGATCATCGGGACATTGCCGGTCGTCATTCCGCT
TTTCGCTAACGTTCTCTATAGCCAACGAGACGGCAGATTATCCTGGCGGCGTTTAGCGCCCGCGCTGGCGCTTATCGGTT
TTGGCCTGCTGTGCGTCAATATTGCTGAACTTAGCCAGGGATTGTCCGATGTTAGCGGCTGGCGCTATGGTTCAGGCATT
GTGCTGGCGCTGATTTCCGTAGCGTGCTGGGCATGGTATGCGCTGCGCAACGCCCGCTGGCTGCGGGAAAATCCCGACAA
ACATCCCATGATGTGGGCAACGGCGCAGGCGCTGGTTACGCTGCCGGTCTCGTTAATCGGCTATGCGGCGGTCTGTCTGT
GGCTGAGTATCCAGAAACCGCTGTTTACCCTGCCCTTTGGCCCGCATCCCGCGCTGTTTATCGGTCTGATGATCGCCATC
GCGGTGCTGTGTTCCTGGGTGGGCGCGCTGTGCTGGAATATCGCCAGCCAAAAATTGCCAACCGTTATTTTAGGGCCGCT
GATTGTTTTTGAGACGTTGGCGGGACTGCTCTATACCTTCATTCTGCGCCAGGAAATCCCGCCATTCCTGACGTTAAGCG
GCATTGCGCTCCTGGTGGCGGGCGTGGTCATTGCCGTGAGAGCGAAACCGGAAAAAGCGACCGTCGTTCCGGTCACGGAA
CGCTAA

Upstream 100 bases:

>100_bases
GCCTTCGCTCCGTACTGTAAATGTTAAAATTTAGTTAATTTATGTGGCATCCTCATAGACCTTCTCTGATAATGACGGAA
CGGTTTATGAGGAGAATCTG

Downstream 100 bases:

>100_bases
TTTCATACTCGCTTAAATTATACGCACCCCGAAAGAGTTATAGCTTCGCCTTAAAGATGCATTTAAAATACAACTTATAT
TATTGCAAATGAGGTAACGG

Product: cationic amino acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLTRKDWSTALSLTLMGNVIYYA
CLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRLSWRRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGI
VLALISVACWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYAAVCLWLSIQKPLFTLPFGPHPALFIGLMIAI
AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVAGVVIAVRAKPEKATVVPVTE
R

Sequences:

>Translated_321_residues
MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLTRKDWSTALSLTLMGNVIYYA
CLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRLSWRRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGI
VLALISVACWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYAAVCLWLSIQKPLFTLPFGPHPALFIGLMIAI
AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVAGVVIAVRAKPEKATVVPVTE
R
>Mature_321_residues
MISGVLYALLAGLMWGLIFVGPLIVPDYPALLQSMGRYLALGLIALPIAWLGRTRLRQLTRKDWSTALSLTLMGNVIYYA
CLASAIQRTGAPVSTMIIGTLPVVIPLFANVLYSQRDGRLSWRRLAPALALIGFGLLCVNIAELSQGLSDVSGWRYGSGI
VLALISVACWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYAAVCLWLSIQKPLFTLPFGPHPALFIGLMIAI
AVLCSWVGALCWNIASQKLPTVILGPLIVFETLAGLLYTFILRQEIPPFLTLSGIALLVAGVVIAVRAKPEKATVVPVTE
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=320, Percent_Identity=81.875, Blast_Score=521, Evalue=1e-149,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34902; Mature: 34902

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCCCEEECCCCC
>Mature Secondary Structure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HHHHHHCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]