Click here to switch to the map view.

The map label for this gene is ecnR [H]

Identifier: 16767586

GI number: 16767586

Start: 4580656

End: 4581243

Strand: Reverse

Name: ecnR [H]

Synonym: STM4337

Alternate gene names: 16767586

Gene position: 4581243-4580656 (Counterclockwise)

Preceding gene: 16767588

Following gene: 16767582

Centisome position: 94.31

GC content: 46.6

Gene sequence:

>588_bases
ATGTTGAAAATTTTAGTGATAGACCGATGCCACTTTACCCGTACGGGCATGGAGGCCTGGCTTAATCACACTGATGTGCT
CAGTTCTTCACTGCTGGTATCCGGGATGAATAACCTTATACTGGCGAAAGAACATATTCTGCAATGGAAGCCCCACCTGG
TTATCGCTGATTTATATGGTTTTCTCAACGATGCCTTACCCGAACAGCCTATCAATGCATTTTTTGCCGCCTGCAGGATG
ACGCCGTTGGTATTATTACAGTCAGGGAATATGCCGTACAGACCGCAATATGCCAGTCATGCGGTGTTATCTAAACACAC
GCCTTTACATGAGCTTGCACAACGAATTAAAGGAGCGCTACATACTCATCCACTGCAGGAAGCGCCGGAAAGCGCCACGC
CATTGCTCTCTCCGCAGGAGGAAAAAGTGCTCGCGATGTGGACGGAAGGCACCAGCAATAAAGAGATTGCGTATGCGCTT
GGCATTCACGGGAAAACGGTTTACACCTATAAACGTAATATCCGTATGAAACTTCATATGGATAACCGGTATTCTCCCTT
TCTTATGCTTCCGGAGAAAATCGATTAA

Upstream 100 bases:

>100_bases
AAGCCGCGTAGTTTTCGCATTTAGCGCCCACAGGAGTTCTCTATGATGGAACGCCTTCTGGGAAAGAAAGTGCTTTATCT
ACTTCCGGGTGCAAAAAACT

Downstream 100 bases:

>100_bases
CGGTACGACGCCATGCCGTACCGTTGATGATTACTGCTGAGCTCTGGTTGCAGCGCCAGAGATCGCACTACCACCGTCCG
AGATGTCCTCGCCCACGCCG

Product: regulatory protein

Products: NA

Alternate protein names: Entericidin R [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLKILVIDRCHFTRTGMEAWLNHTDVLSSSLLVSGMNNLILAKEHILQWKPHLVIADLYGFLNDALPEQPINAFFAACRM
TPLVLLQSGNMPYRPQYASHAVLSKHTPLHELAQRIKGALHTHPLQEAPESATPLLSPQEEKVLAMWTEGTSNKEIAYAL
GIHGKTVYTYKRNIRMKLHMDNRYSPFLMLPEKID

Sequences:

>Translated_195_residues
MLKILVIDRCHFTRTGMEAWLNHTDVLSSSLLVSGMNNLILAKEHILQWKPHLVIADLYGFLNDALPEQPINAFFAACRM
TPLVLLQSGNMPYRPQYASHAVLSKHTPLHELAQRIKGALHTHPLQEAPESATPLLSPQEEKVLAMWTEGTSNKEIAYAL
GIHGKTVYTYKRNIRMKLHMDNRYSPFLMLPEKID
>Mature_195_residues
MLKILVIDRCHFTRTGMEAWLNHTDVLSSSLLVSGMNNLILAKEHILQWKPHLVIADLYGFLNDALPEQPINAFFAACRM
TPLVLLQSGNMPYRPQYASHAVLSKHTPLHELAQRIKGALHTHPLQEAPESATPLLSPQEEKVLAMWTEGTSNKEIAYAL
GIHGKTVYTYKRNIRMKLHMDNRYSPFLMLPEKID

Specific function: May serve to repress the entericidin locus in c.freundii [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 22177; Mature: 22177

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKILVIDRCHFTRTGMEAWLNHTDVLSSSLLVSGMNNLILAKEHILQWKPHLVIADLYG
CEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHH
FLNDALPEQPINAFFAACRMTPLVLLQSGNMPYRPQYASHAVLSKHTPLHELAQRIKGAL
HHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
HTHPLQEAPESATPLLSPQEEKVLAMWTEGTSNKEIAYALGIHGKTVYTYKRNIRMKLHM
HCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEECEEEEEEE
DNRYSPFLMLPEKID
CCCCCCEEECCCCCC
>Mature Secondary Structure
MLKILVIDRCHFTRTGMEAWLNHTDVLSSSLLVSGMNNLILAKEHILQWKPHLVIADLYG
CEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHCCCCEEEHHHHHHCCCCCCHHHHHHH
FLNDALPEQPINAFFAACRMTPLVLLQSGNMPYRPQYASHAVLSKHTPLHELAQRIKGAL
HHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
HTHPLQEAPESATPLLSPQEEKVLAMWTEGTSNKEIAYALGIHGKTVYTYKRNIRMKLHM
HCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEECEEEEEEE
DNRYSPFLMLPEKID
CCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9677290 [H]