| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yjeJ [H]
Identifier: 16767581
GI number: 16767581
Start: 4577402
End: 4578259
Strand: Reverse
Name: yjeJ [H]
Synonym: STM4332
Alternate gene names: 16767581
Gene position: 4578259-4577402 (Counterclockwise)
Preceding gene: 16767582
Following gene: 16767577
Centisome position: 94.25
GC content: 44.64
Gene sequence:
>858_bases ATGGCCTTAACGATTAAGGGACTAAATACCGGCGTTATTCGTCACAATGATAAGTTTATCGCGCTGGCGCTTAAGGTGAA GTCACTGAGAAATAAAGAAACACTGCTTTTCTTTCCTGTGCTCGCGCTGCGAGACTTGTTGATCGGCCTTGAACACCGGC TTTATCTACAACACTCGCTTCCGGAACAAGAGCAGGAAAAACGCCAGAAAGCTAAAAGCAGTCATGTGCTTAAAATGCAT GAGAATATTCCGGCAATACTCCGTGAAGAGCTGGAAAACGCCGATGTTAATCAGCGTGTTGAATCTTTAGCGTTGAGCGA TAATACAGAAAAAGTATTAACCTTTACGTTAAAGCTGCACAATGGTAGCCATCTTGATTTACAGGTCGGTGAGTGGCAGG TTGAAGTTCTGGTGATGGCTATTATTCACGCCATTAATAATGCCGAAATGCGTGAGCTCGCATTGCGTATTTCTTCAATG CTGGACTTTTTACCATTATACGATGCTGACTGCCTGGAAAACGGTAATATCGAATTCGATACCTATAACCAGCCTGACTG GAAACATAATCTGTATAACCATTATTTAGCGCTCGTTTATCGTTATACGGATGAGGCAGGACAATCGCATGATTGCGGCA CCATCATTAAGACCCGTAGTCAGTCAGGCTCTAAAGAAGCTGAAGCAATATCACGCCGCTTGCTGAATTTCAGCCCGCGT CTTAAAAAGCTGGAAGGAAAACCGTGTAAGGTTTTTGTCAGAACGCTTGGAACCGGTAAAGCAGCGCGTCTGACGCAAGA TCAATGCATGCGCGCGTTGCATAATCTACGCATGGCATCATCGCAGGAAAAACGCTAA
Upstream 100 bases:
>100_bases ATTATACTGGTTCTCCTTTTTATAGGACGGCATAAACAATTTATATATCAAATACATTGCAGTAAAACATTTAATTATTT TATATTTGTGGAGAATTGAC
Downstream 100 bases:
>100_bases CCATATCGCCCTCTGAATCTTTCAGAGGGCGTTACGATTCAGACATATCAGTTCGGACATTTATAAACCTGGCCGTTCAT CTCGCTGGCCGTCGGGACAA
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MALTIKGLNTGVIRHNDKFIALALKVKSLRNKETLLFFPVLALRDLLIGLEHRLYLQHSLPEQEQEKRQKAKSSHVLKMH ENIPAILREELENADVNQRVESLALSDNTEKVLTFTLKLHNGSHLDLQVGEWQVEVLVMAIIHAINNAEMRELALRISSM LDFLPLYDADCLENGNIEFDTYNQPDWKHNLYNHYLALVYRYTDEAGQSHDCGTIIKTRSQSGSKEAEAISRRLLNFSPR LKKLEGKPCKVFVRTLGTGKAARLTQDQCMRALHNLRMASSQEKR
Sequences:
>Translated_285_residues MALTIKGLNTGVIRHNDKFIALALKVKSLRNKETLLFFPVLALRDLLIGLEHRLYLQHSLPEQEQEKRQKAKSSHVLKMH ENIPAILREELENADVNQRVESLALSDNTEKVLTFTLKLHNGSHLDLQVGEWQVEVLVMAIIHAINNAEMRELALRISSM LDFLPLYDADCLENGNIEFDTYNQPDWKHNLYNHYLALVYRYTDEAGQSHDCGTIIKTRSQSGSKEAEAISRRLLNFSPR LKKLEGKPCKVFVRTLGTGKAARLTQDQCMRALHNLRMASSQEKR >Mature_284_residues ALTIKGLNTGVIRHNDKFIALALKVKSLRNKETLLFFPVLALRDLLIGLEHRLYLQHSLPEQEQEKRQKAKSSHVLKMHE NIPAILREELENADVNQRVESLALSDNTEKVLTFTLKLHNGSHLDLQVGEWQVEVLVMAIIHAINNAEMRELALRISSML DFLPLYDADCLENGNIEFDTYNQPDWKHNLYNHYLALVYRYTDEAGQSHDCGTIIKTRSQSGSKEAEAISRRLLNFSPRL KKLEGKPCKVFVRTLGTGKAARLTQDQCMRALHNLRMASSQEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790588, Length=281, Percent_Identity=59.0747330960854, Blast_Score=355, Evalue=2e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32650; Mature: 32519
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTIKGLNTGVIRHNDKFIALALKVKSLRNKETLLFFPVLALRDLLIGLEHRLYLQHSL CEEEEECCCCCEEEECCCEEEEEEEHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC PEQEQEKRQKAKSSHVLKMHENIPAILREELENADVNQRVESLALSDNTEKVLTFTLKLH CHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEC NGSHLDLQVGEWQVEVLVMAIIHAINNAEMRELALRISSMLDFLPLYDADCLENGNIEFD CCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEE TYNQPDWKHNLYNHYLALVYRYTDEAGQSHDCGTIIKTRSQSGSKEAEAISRRLLNFSPR CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHCCCCH LKKLEGKPCKVFVRTLGTGKAARLTQDQCMRALHNLRMASSQEKR HHHCCCCCCEEHEEHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALTIKGLNTGVIRHNDKFIALALKVKSLRNKETLLFFPVLALRDLLIGLEHRLYLQHSL EEEEECCCCCEEEECCCEEEEEEEHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCC PEQEQEKRQKAKSSHVLKMHENIPAILREELENADVNQRVESLALSDNTEKVLTFTLKLH CHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEC NGSHLDLQVGEWQVEVLVMAIIHAINNAEMRELALRISSMLDFLPLYDADCLENGNIEFD CCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEE TYNQPDWKHNLYNHYLALVYRYTDEAGQSHDCGTIIKTRSQSGSKEAEAISRRLLNFSPR CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEECCCCCCHHHHHHHHHHHCCCCH LKKLEGKPCKVFVRTLGTGKAARLTQDQCMRALHNLRMASSQEKR HHHCCCCCCEEHEEHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]