| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is yjeI [H]
Identifier: 16767580
GI number: 16767580
Start: 4576983
End: 4577354
Strand: Direct
Name: yjeI [H]
Synonym: STM4331
Alternate gene names: 16767580
Gene position: 4576983-4577354 (Clockwise)
Preceding gene: 16767579
Following gene: 16767583
Centisome position: 94.23
GC content: 54.57
Gene sequence:
>372_bases TTGATTATGGGGAATAACATGCACGTGAAATATTTAGCAGGGATCGTTGGCGCCGCGCTGCTGATGGCGGGTTGTAGCTC CAGCAACGAACTCACCGCTGCCGGCCAAAATGTACGCTTTGTCGAAGATAAGCCGGGCGCGGAATGCCAGCTTATTGGTA CGGCAACTGGTAAACAGAGTAACTGGTTTTCAGGCCAGCACGGCGAAGAGGGTGGCTCAATGCGTGGCGCAGCGAACGAT CTGCGTAATCAGGCAGCCGCGATGGGTGGAAACGTGCTGTATGGCGTAAGTAGTCCGTCACAGGGCATGTTGTCCAGTTT TGTCCCGACGGCCAGCGAGATGAACGGCCAGGTTTATAAATGTCCGAACTGA
Upstream 100 bases:
>100_bases CTCCCAGAATTGAGAAACCCCCGGGCAGAAATGACCGGGGGTTTTTCTTTTAGTCATCTTTTTAGTATAAGATTCAGATA CGGACAAAACGTCCAGCTCA
Downstream 100 bases:
>100_bases TATGTCTGAATCGTAACGCCCTCTGAAAGATTCAGAGGGCGATATGGTTAGCGTTTTTCCTGCGATGATGCCATGCGTAG ATTATGCAACGCGCGCATGC
Product: outer membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MIMGNNMHVKYLAGIVGAALLMAGCSSSNELTAAGQNVRFVEDKPGAECQLIGTATGKQSNWFSGQHGEEGGSMRGAAND LRNQAAAMGGNVLYGVSSPSQGMLSSFVPTASEMNGQVYKCPN
Sequences:
>Translated_123_residues MIMGNNMHVKYLAGIVGAALLMAGCSSSNELTAAGQNVRFVEDKPGAECQLIGTATGKQSNWFSGQHGEEGGSMRGAAND LRNQAAAMGGNVLYGVSSPSQGMLSSFVPTASEMNGQVYKCPN >Mature_123_residues MIMGNNMHVKYLAGIVGAALLMAGCSSSNELTAAGQNVRFVEDKPGAECQLIGTATGKQSNWFSGQHGEEGGSMRGAAND LRNQAAAMGGNVLYGVSSPSQGMLSSFVPTASEMNGQVYKCPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082377, Length=117, Percent_Identity=88.8888888888889, Blast_Score=219, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12690; Mature: 12690
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMGNNMHVKYLAGIVGAALLMAGCSSSNELTAAGQNVRFVEDKPGAECQLIGTATGKQS CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCEEEEEECCCCCCC NWFSGQHGEEGGSMRGAANDLRNQAAAMGGNVLYGVSSPSQGMLSSFVPTASEMNGQVYK CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCHHCCCEEEE CPN CCC >Mature Secondary Structure MIMGNNMHVKYLAGIVGAALLMAGCSSSNELTAAGQNVRFVEDKPGAECQLIGTATGKQS CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCEEEEEECCCCCCC NWFSGQHGEEGGSMRGAANDLRNQAAAMGGNVLYGVSSPSQGMLSSFVPTASEMNGQVYK CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCHHCCCEEEE CPN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]