| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is dipZ [H]
Identifier: 16767572
GI number: 16767572
Start: 4567382
End: 4569085
Strand: Reverse
Name: dipZ [H]
Synonym: STM4323
Alternate gene names: 16767572
Gene position: 4569085-4567382 (Counterclockwise)
Preceding gene: 16767573
Following gene: 16767571
Centisome position: 94.06
GC content: 56.57
Gene sequence:
>1704_bases ATGGCTCAACGCATCTTTACGCTGATCCTGCTGCTGTGCAGCACATCCGCCTTCGCCGGATTATTCGACGCGCCGGGTCG CTCGCAGTTCGTCCCTGCCGACCGGGCGTTTGTTTTTGATTTTCAGCAAAATCAACACGATCTTACCCTCTCCTGGCAGG TAAAAGAGGGTTACTACCTTTACCGTAAACAAATCAGTATCACGCCGACGAAAGCGGATATCGCCGCAGTCCAACTCCCG ACAGGCGTCTGGCATGAAGATGAGTTCTACGGAAAAAGCGAAATCTACCGTAAGCGGCTAAACGTTCCAGTAACGGTTAA CCAGGCGGCGGCTGGCGCGACATTAACGGTAACGTACCAGGGGTGCGCCGATGCGGGATTCTGTTATCCGCCGGAAACGA AAACGGTGCCGCTAAGTGAAGTCGCCGCGGCAATAGACGCCACGCCGACGCCTGCTGTCACCCAGACGAGTGAGACGTCA AAACCCGCCGCCCAGCTACCTTTTTCCGCGCTCTGGGCGCTGCTGATCGGCATAGGCATCGCCTTTACGCCCTGCGTTTT ACCCATGTATCCGCTGATTTCCGGTATTGTCCTGGGGGGAAGGCAACGTTTGTCGACGGGGCGCGCACTGCTGCTGGCCT TTATCTATGTACAAGGGATGGCGCTGACCTATACCGCACTGGGTCTGGTCGTCGCCGCGGCGGGATTACAGTTTCAGGCG GCGCTGCAGCACCCTTATGTGTTAATCGGCCTTGCCATCGTGTTCACCCTGCTTGCGTTGTCGATGTTTGGCCTGTTCAC ACTACAGCTCCCCTCCTCACTGCAAACCCGGCTGACATTAATGAGTAATCGTCAGCAAGGCGGCTCGCCCGGCGGTGTTT TTGTTATGGGGGCGATTGCCGGATTAATTTGCTCGCCCTGCACTACAGCGCCGTTAAGCGCGATTCTGCTTTATATCGCT CAGAGCGGCAACATGTGGCTGGGCGGCGGCACGCTGTATTTGTATGCATTAGGTATGGGTCTGCCGCTAATGCTGGTCAC CGTGTTTGGCAACCGTCTGTTACCGAAAAGCGGCCCGTGGATGGCGCATGTTAAAACCGCTTTTGGTTTCGTGATCCTCG CGTTACCGGTCTTTTTACTGGAGCGGATTATTGGCGAGGCTTGGGGTTTACGTCTGTGGTCGCTGCTGGGCGTCGCTTTC TTTGGTTGGGCCTTTATCACCAGCCTTCAGGCCAGACGAGCGTGGATGCGTATCGTACAGATTATCCTGCTGGCGGCAGC GCTCATTAGCGTGCGGCCTCTACAGGATTGGGCGTTCGGATCGCCATCCGCGCAAGCTCCAGCGCACCTCAATTTCACGG CTATTTCTACCGTGGATGAACTCAATCAGGCGCTGGCGCAGGCCAAAGGCAAACCCGTTATGCTGGATTTCTACGCCGAC TGGTGCGTGGCCTGTAAAGAGTTTGAAAAGTATACCTTCAGCGATCCGCGGGTCCAGCAGGCGCTCGGCGACACGGTGCT CTTGCAGGCTAACGTCACCGCTAACAATGCGCAGGATGTCGCGCTGTTAAAGCATCTGCAAGTCCTCGGGCTGCCCACCA TTCTGTTCTTTAATACCCAAGGCCAGGAACAGCCGCAATCGCGAGTCACCGGCTTTATGGACGCCGCCACCTTTAGCGCG CATTTGCACGATCGCCAACCGTGA
Upstream 100 bases:
>100_bases ATCAGCAAGCGCTTATCGACTGCCTGAAGTCTCATCACCCGTATCAAACGCCTGAACTTCTGGTTTTACCTGTTACTCAC GGAGATACTGATTACCTCTC
Downstream 100 bases:
>100_bases GCGACACTTGCAAAAGCAAAGACGGAGGAGAATACCGTGCAACGTGAAGATATTCTGGGAGAAGCCCTGAAATTACTGGA GACGCAAGGGATAGCCGATA
Product: thiol:disulfide interchange protein precursor
Products: NA
Alternate protein names: Protein-disulfide reductase; Disulfide reductase [H]
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MAQRIFTLILLLCSTSAFAGLFDAPGRSQFVPADRAFVFDFQQNQHDLTLSWQVKEGYYLYRKQISITPTKADIAAVQLP TGVWHEDEFYGKSEIYRKRLNVPVTVNQAAAGATLTVTYQGCADAGFCYPPETKTVPLSEVAAAIDATPTPAVTQTSETS KPAAQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGRQRLSTGRALLLAFIYVQGMALTYTALGLVVAAAGLQFQA ALQHPYVLIGLAIVFTLLALSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIA QSGNMWLGGGTLYLYALGMGLPLMLVTVFGNRLLPKSGPWMAHVKTAFGFVILALPVFLLERIIGEAWGLRLWSLLGVAF FGWAFITSLQARRAWMRIVQIILLAAALISVRPLQDWAFGSPSAQAPAHLNFTAISTVDELNQALAQAKGKPVMLDFYAD WCVACKEFEKYTFSDPRVQQALGDTVLLQANVTANNAQDVALLKHLQVLGLPTILFFNTQGQEQPQSRVTGFMDAATFSA HLHDRQP
Sequences:
>Translated_567_residues MAQRIFTLILLLCSTSAFAGLFDAPGRSQFVPADRAFVFDFQQNQHDLTLSWQVKEGYYLYRKQISITPTKADIAAVQLP TGVWHEDEFYGKSEIYRKRLNVPVTVNQAAAGATLTVTYQGCADAGFCYPPETKTVPLSEVAAAIDATPTPAVTQTSETS KPAAQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGRQRLSTGRALLLAFIYVQGMALTYTALGLVVAAAGLQFQA ALQHPYVLIGLAIVFTLLALSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIA QSGNMWLGGGTLYLYALGMGLPLMLVTVFGNRLLPKSGPWMAHVKTAFGFVILALPVFLLERIIGEAWGLRLWSLLGVAF FGWAFITSLQARRAWMRIVQIILLAAALISVRPLQDWAFGSPSAQAPAHLNFTAISTVDELNQALAQAKGKPVMLDFYAD WCVACKEFEKYTFSDPRVQQALGDTVLLQANVTANNAQDVALLKHLQVLGLPTILFFNTQGQEQPQSRVTGFMDAATFSA HLHDRQP >Mature_566_residues AQRIFTLILLLCSTSAFAGLFDAPGRSQFVPADRAFVFDFQQNQHDLTLSWQVKEGYYLYRKQISITPTKADIAAVQLPT GVWHEDEFYGKSEIYRKRLNVPVTVNQAAAGATLTVTYQGCADAGFCYPPETKTVPLSEVAAAIDATPTPAVTQTSETSK PAAQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGRQRLSTGRALLLAFIYVQGMALTYTALGLVVAAAGLQFQAA LQHPYVLIGLAIVFTLLALSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQ SGNMWLGGGTLYLYALGMGLPLMLVTVFGNRLLPKSGPWMAHVKTAFGFVILALPVFLLERIIGEAWGLRLWSLLGVAFF GWAFITSLQARRAWMRIVQIILLAAALISVRPLQDWAFGSPSAQAPAHLNFTAISTVDELNQALAQAKGKPVMLDFYADW CVACKEFEKYTFSDPRVQQALGDTVLLQANVTANNAQDVALLKHLQVLGLPTILFFNTQGQEQPQSRVTGFMDAATFSAH LHDRQP
Specific function: Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1790578, Length=568, Percent_Identity=87.5, Blast_Score=1010, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003834 - InterPro: IPR022910 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF02683 DsbD; PF00085 Thioredoxin [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 61419; Mature: 61288
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRIFTLILLLCSTSAFAGLFDAPGRSQFVPADRAFVFDFQQNQHDLTLSWQVKEGYYL CHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCEEE YRKQISITPTKADIAAVQLPTGVWHEDEFYGKSEIYRKRLNVPVTVNQAAAGATLTVTYQ EEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEEEEC GCADAGFCYPPETKTVPLSEVAAAIDATPTPAVTQTSETSKPAAQLPFSALWALLIGIGI CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH AFTPCVLPMYPLISGIVLGGRQRLSTGRALLLAFIYVQGMALTYTALGLVVAAAGLQFQA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALQHPYVLIGLAIVFTLLALSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIA HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH GLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYALGMGLPLMLVTVFGNRLLPKSGPW HHHCCCCCCHHHHHHHHHHHCCCCEEECCCHHEEHHHHCCHHHHHHHHHCCCCCCCCCCC MAHVKTAFGFVILALPVFLLERIIGEAWGLRLWSLLGVAFFGWAFITSLQARRAWMRIVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILLAAALISVRPLQDWAFGSPSAQAPAHLNFTAISTVDELNQALAQAKGKPVMLDFYAD HHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEHHH WCVACKEFEKYTFSDPRVQQALGDTVLLQANVTANNAQDVALLKHLQVLGLPTILFFNTQ HHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC GQEQPQSRVTGFMDAATFSAHLHDRQP CCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AQRIFTLILLLCSTSAFAGLFDAPGRSQFVPADRAFVFDFQQNQHDLTLSWQVKEGYYL HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCEEE YRKQISITPTKADIAAVQLPTGVWHEDEFYGKSEIYRKRLNVPVTVNQAAAGATLTVTYQ EEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEEEEC GCADAGFCYPPETKTVPLSEVAAAIDATPTPAVTQTSETSKPAAQLPFSALWALLIGIGI CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHH AFTPCVLPMYPLISGIVLGGRQRLSTGRALLLAFIYVQGMALTYTALGLVVAAAGLQFQA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALQHPYVLIGLAIVFTLLALSMFGLFTLQLPSSLQTRLTLMSNRQQGGSPGGVFVMGAIA HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH GLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYALGMGLPLMLVTVFGNRLLPKSGPW HHHCCCCCCHHHHHHHHHHHCCCCEEECCCHHEEHHHHCCHHHHHHHHHCCCCCCCCCCC MAHVKTAFGFVILALPVFLLERIIGEAWGLRLWSLLGVAFFGWAFITSLQARRAWMRIVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IILLAAALISVRPLQDWAFGSPSAQAPAHLNFTAISTVDELNQALAQAKGKPVMLDFYAD HHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEHHH WCVACKEFEKYTFSDPRVQQALGDTVLLQANVTANNAQDVALLKHLQVLGLPTILFFNTQ HHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC GQEQPQSRVTGFMDAATFSAHLHDRQP CCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA