| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is phnB [H]
Identifier: 16767538
GI number: 16767538
Start: 4529604
End: 4530047
Strand: Reverse
Name: phnB [H]
Synonym: STM4288
Alternate gene names: 16767538
Gene position: 4530047-4529604 (Counterclockwise)
Preceding gene: 16767539
Following gene: 39546395
Centisome position: 93.26
GC content: 54.73
Gene sequence:
>444_bases ATGCCGTTAAGTCCCTATCTCTCTTTTGCCGGCAACTGTGCCGACGCCATCGCGTATTATCAACAAACGTTAGGCGCAGA ACTGCTTTATAAACTCAGCTTCGGTGAAATGCCCCCCTCGGCGGCGGATAACGAAGAGGGTTGCCCGTCAGGAATGCGCT TTCCCGATACAGCTATCGCCCACGCCAACATGCGCATTGCCGGCAGCGATATCATGATGAGTGATGCCAGCGCGTCGGGA AGGGCGCATTATTCCGGCTTTACGCTGGTGCTTGATACCCAGGATGTAGCAGAAGGGAAGCGCTGGTTTGATAACCTTGC CGCACAAGGGCAAATCGAAATGGACTGGCAGGAGACCTTCTGGGCGCAGGGTTTCGGCAAGGTCAGCGATCGTTTCGGTG TGCCGTGGATGATTAACGTGGTTAAACATCAGCCTGCCACCTAA
Upstream 100 bases:
>100_bases GTAGCGCCTTGCTTACCGGGCCTGAGCGGCCCTGCCACCGACAATATTGTGCCAATTTCGAACTACACTTAACGAGCATC TCTTACCTGAGGTAACCATC
Downstream 100 bases:
>100_bases CTCCCCGGGAGGCTCGCCCTCCCCCTTGCCATCAGAGTGATCTTTGGCTGCACGTTATCCGCCGTTTAACTGTCATAGAA TAAATAATGACGGTAGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPLSPYLSFAGNCADAIAYYQQTLGAELLYKLSFGEMPPSAADNEEGCPSGMRFPDTAIAHANMRIAGSDIMMSDASASG RAHYSGFTLVLDTQDVAEGKRWFDNLAAQGQIEMDWQETFWAQGFGKVSDRFGVPWMINVVKHQPAT
Sequences:
>Translated_147_residues MPLSPYLSFAGNCADAIAYYQQTLGAELLYKLSFGEMPPSAADNEEGCPSGMRFPDTAIAHANMRIAGSDIMMSDASASG RAHYSGFTLVLDTQDVAEGKRWFDNLAAQGQIEMDWQETFWAQGFGKVSDRFGVPWMINVVKHQPAT >Mature_146_residues PLSPYLSFAGNCADAIAYYQQTLGAELLYKLSFGEMPPSAADNEEGCPSGMRFPDTAIAHANMRIAGSDIMMSDASASGR AHYSGFTLVLDTQDVAEGKRWFDNLAAQGQIEMDWQETFWAQGFGKVSDRFGVPWMINVVKHQPAT
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=145, Percent_Identity=83.448275862069, Blast_Score=261, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16093; Mature: 15962
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSPYLSFAGNCADAIAYYQQTLGAELLYKLSFGEMPPSAADNEEGCPSGMRFPDTAIA CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE HANMRIAGSDIMMSDASASGRAHYSGFTLVLDTQDVAEGKRWFDNLAAQGQIEMDWQETF ECCEEEECCCEEEECCCCCCCEECCCEEEEEECHHHHHHHHHHHHHHCCCEEEECHHHHH WAQGFGKVSDRFGVPWMINVVKHQPAT HHHCCCCHHHCCCCCEEEEEECCCCCC >Mature Secondary Structure PLSPYLSFAGNCADAIAYYQQTLGAELLYKLSFGEMPPSAADNEEGCPSGMRFPDTAIA CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEE HANMRIAGSDIMMSDASASGRAHYSGFTLVLDTQDVAEGKRWFDNLAAQGQIEMDWQETF ECCEEEECCCEEEECCCCCCCEECCCEEEEEECHHHHHHHHHHHHHHCCCEEEECHHHHH WAQGFGKVSDRFGVPWMINVVKHQPAT HHHCCCCHHHCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]