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The map label for this gene is 16767492

Identifier: 16767492

GI number: 16767492

Start: 4462562

End: 4463872

Strand: Direct

Name: 16767492

Synonym: STM4242

Alternate gene names: NA

Gene position: 4462562-4463872 (Clockwise)

Preceding gene: 16767490

Following gene: 16767493

Centisome position: 91.87

GC content: 52.17

Gene sequence:

>1311_bases
GTGAACAAAAACGTCAAACTTTCACTGATTGCTATCGCGGTCTCGCTTTTTATGGCAAAGCAGGCGAGCGCCGCCAATAC
CTGGACGGAAGCGCGTAATGACGCAATGGGCGGGACGGGCGTTGCGTCCGCGAATTATGGCAGCGGAGTACTATTAAATC
CGGCGTTACTGGCAAAAGCCAAACCGGAAGACAATATCACTGTTGTCCTTCCTGCGGTCGGCGTCCAGATTACGGATAAA
GACAATCTCCAGGATGAAATTGACGATATCAGCGATAAAGTGGATTACTACGATGAGGTCGTCGATAACCTTACGCTGGG
GCAAATTCTGCTCAATCCGCGAGGCGTGCTGAATCAATTTCAGGGCGCCGCGCGCGACCTGGCCGATGAGCTGGAATATC
TCAACGGAAAAACCGCCCGCGCCAATGCCGGCGCCGGGTTGGCGGTAAGTATTCCAGGGCAAACGCTTTCCGTGGCGTTT
ATCGCCAAAGGTTATGCGCATGGGCGCGTGAGTTCGTCCATTGATCAGAACGATATTCAGTATCTGCGCGATATCCAGCA
TGATGAACGTGTCGCGCTTCGTGAAGCAGGACGCGCTGCTTTGCTGGGGTCTGACGAAATTACAAAGCATTTAAACTCTA
CCGCGTCGGGGCGGGTAGCGATTGTATCTGACTACGGTATTGCGCTGGCGAAGCAGTTTGTGGTGGGCGAGGTGCCTGTT
TCCATTGGCGTTACGCCAAAACTGCAAAAAACCTGGCTCTATAACTACACCACCTCAATTTATAACTACGACAGTAGCGA
CTGGAATAGCAGCCGTTATCGCAATGACGATACGGGTTTTAACATTGATGCGGGGCTTGCTGCCGATATCGGTGAAAACT
GGACGCTGGGGGTGAGCGGACAAAATCTGGTATCTCGCGATATCGATACGAAAGATATTTACATCACTAATGGTATGACG
GGAGAAACCACCAACTACAAAGATACATACCAAATCCGCCCCCTGGTTACCGCGGGCATCGCATGGCATAACGATTTGCT
GACCGTAAGCGCCGATGGCGATCTGACGGAAACGAAAGGCTTTAAGAGCGAAGACAATTCACAGTACGTTGGCGTCGGCG
CTGAAGTTCGACCGTTGTCATGGCTGGCGGTGCGCGCAGGGTATCGTGCGGATGTGAAAAATAACGATAGCAATGTGGTT
ACCGGCGGTCTTGGCTTTGCGCCCTTTAACCGTGTGCATCTCGATTTAATGGGACTGTACGGCGAAGATGAAACCTGGGG
GGCAGGCGCGCAGCTTACAATGACATTCTGA

Upstream 100 bases:

>100_bases
ACAACAGGATTTAACATCACTATTTCACAGCAATAGTTCGCCTCTGTCCGGTAAAGCGTGGTGGAGGAATTACTTCACCT
GATAATAAGATGGGCTAACT

Downstream 100 bases:

>100_bases
GGTGCTTTCACCGGAGGCGCTACGCCTCCGGTTTAGCGTTATGCTATAGTAACGCCCCTTTTTTAACCGGATGCTTATTT
ATTCGCCATGCAGCCTGAAA

Product: conjugative transfer protein

Products: NA

Alternate protein names: Plasmid Transfer Protein TraF; TraF Protein; Conjugative Transfer Protein; Outer Membrane Or Exported; TraF-Related Protein; IncI1 Plasmid Conjugative Transfer Protein TraF

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKAKPEDNITVVLPAVGVQITDK
DNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQFQGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAF
IAKGYAHGRVSSSIDQNDIQYLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV
SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGVSGQNLVSRDIDTKDIYITNGMT
GETTNYKDTYQIRPLVTAGIAWHNDLLTVSADGDLTETKGFKSEDNSQYVGVGAEVRPLSWLAVRAGYRADVKNNDSNVV
TGGLGFAPFNRVHLDLMGLYGEDETWGAGAQLTMTF

Sequences:

>Translated_436_residues
MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKAKPEDNITVVLPAVGVQITDK
DNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQFQGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAF
IAKGYAHGRVSSSIDQNDIQYLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV
SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGVSGQNLVSRDIDTKDIYITNGMT
GETTNYKDTYQIRPLVTAGIAWHNDLLTVSADGDLTETKGFKSEDNSQYVGVGAEVRPLSWLAVRAGYRADVKNNDSNVV
TGGLGFAPFNRVHLDLMGLYGEDETWGAGAQLTMTF
>Mature_436_residues
MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKAKPEDNITVVLPAVGVQITDK
DNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQFQGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAF
IAKGYAHGRVSSSIDQNDIQYLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV
SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGVSGQNLVSRDIDTKDIYITNGMT
GETTNYKDTYQIRPLVTAGIAWHNDLLTVSADGDLTETKGFKSEDNSQYVGVGAEVRPLSWLAVRAGYRADVKNNDSNVV
TGGLGFAPFNRVHLDLMGLYGEDETWGAGAQLTMTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46978; Mature: 46978

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKA
CCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHCCC
KPEDNITVVLPAVGVQITDKDNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQF
CCCCCEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHEEECCHHHHHHH
QGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAFIAKGYAHGRVSSSIDQNDIQ
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHH
YLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV
HHHHCCCCHHHHHHHCCCEEEECCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHEECCCE
SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGVSG
EECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCEECCCCCEEEECCC
QNLVSRDIDTKDIYITNGMTGETTNYKDTYQIRPLVTAGIAWHNDLLTVSADGDLTETKG
CHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECEEECCCEEEEECCCCCHHCCC
FKSEDNSQYVGVGAEVRPLSWLAVRAGYRADVKNNDSNVVTGGLGFAPFNRVHLDLMGLY
CCCCCCCEEEECCCCCCCCEEEEEECCCEECCCCCCCCEEECCCCCCCCCEEEEEEEEEC
GEDETWGAGAQLTMTF
CCCCCCCCCCEEEEEC
>Mature Secondary Structure
MNKNVKLSLIAIAVSLFMAKQASAANTWTEARNDAMGGTGVASANYGSGVLLNPALLAKA
CCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHCCC
KPEDNITVVLPAVGVQITDKDNLQDEIDDISDKVDYYDEVVDNLTLGQILLNPRGVLNQF
CCCCCEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHEEECCHHHHHHH
QGAARDLADELEYLNGKTARANAGAGLAVSIPGQTLSVAFIAKGYAHGRVSSSIDQNDIQ
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCHHHHH
YLRDIQHDERVALREAGRAALLGSDEITKHLNSTASGRVAIVSDYGIALAKQFVVGEVPV
HHHHCCCCHHHHHHHCCCEEEECCHHHHHHHCCCCCCCEEEEECCCHHHHHHHHEECCCE
SIGVTPKLQKTWLYNYTTSIYNYDSSDWNSSRYRNDDTGFNIDAGLAADIGENWTLGVSG
EECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEECCCCEECCCCCEEEECCC
QNLVSRDIDTKDIYITNGMTGETTNYKDTYQIRPLVTAGIAWHNDLLTVSADGDLTETKG
CHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECEEECCCEEEEECCCCCHHCCC
FKSEDNSQYVGVGAEVRPLSWLAVRAGYRADVKNNDSNVVTGGLGFAPFNRVHLDLMGLY
CCCCCCCEEEECCCCCCCCEEEEEECCCEECCCCCCCCEEECCCCCCCCCEEEEEEEEEC
GEDETWGAGAQLTMTF
CCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA