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The map label for this gene is yjbH [H]

Identifier: 16767475

GI number: 16767475

Start: 4443933

End: 4446029

Strand: Direct

Name: yjbH [H]

Synonym: STM4225

Alternate gene names: 16767475

Gene position: 4443933-4446029 (Clockwise)

Preceding gene: 16767474

Following gene: 16767476

Centisome position: 91.49

GC content: 54.36

Gene sequence:

>2097_bases
ATGAAAAAAACACATCTGCTCAGCGTGCTGGCGCTGGGTATTAGCGCGGCCTGCCATGCCGAAACATATCCAGCCCCTGT
TGGGCCTTCACAATCTGACTTTGGCGGCGTGGGCCTGCTGCAAACGCCGACAGCGCGTATGGCGCGTGAAGGGGAGATGA
GCCTGAACTATCGCGATAACGATCAGTACCGCTACTACTCGGCTTCGGTTCAGCTTTTCCCGTGGCTGGAAACCACGTTG
CGCTATACCGATGTCCGTACGAAAAAGTACAGCAGCGTGGAATCATTCTCCGGCGACCAGACTTACAAAGATAAAGCGTT
TGATGTGAAACTGCGGTTGTGGGAAGAGAGTTACTGGATGCCGCAGGTGGCGGTTGGCGCGCGCGATATCGGCGGGACGG
GGCTGTTTGATGCGGAATATATTGTAGCGAGTAAGGCCTGGGGGCCGTTTGATTTTTCATTAGGTCTCGGCTGGGGCTAT
CTTGGCACCAGCGGCAATGTGTCTAATCCTTTCTGTTCGTATAGTGATAAATTCTGTTCGCGTGATAACAGCTACAAAGA
GGCAGGTTCCGTCGACGGTAGCGATATGTTTCACGGCCCGGCCTCGCTGTTTGGCGGCGTGGAATACCAGACCCCGTGGC
AACCGCTACGCCTGAAGCTGGAGTATGAAGGCAATAACTATCAGCAGGATTTTGCGGGTAAACTGGAGCAGAAGAGCAAG
TTTAACGTCGGCGCCATTTACCGCGTCACCGATTGGGCCGACGTTAACCTCAGCTACGAGCGCGGCAATACCTTTATGTT
TGGCGTTACGCTGCGCACCAATTTCAACGATTTACGTCCCGCGTATCATGACAATTCACGCCCGCAATACCGACCACAGC
CGCAGGATGCCATCCTGCAACATTCGGTAGTGGCTAATCAATTAACGTTATTGAAATATAATGCCGGTCTGGCGGACCCG
AAAATCCAGGTCAAAGGCGATACGCTATACGTTACCGGTGAACAGGTGAAGTACCGCGACTCCCGTGAAGGGATCGTGCG
CGCTAACCGGATCGTCATGAACGATCTGCCGGAGGGGATCCGCACGATCCGCGTGACGGAAAACCGCCTTAATCTGCCGC
AGGTCACCACTGAAACCGATGTCGCCAGCCTGAAACGCCATCTGGAAGGCGAACCGCTGGGACATGAAACTCCGCTGGCG
CAAAAACGCGTGGAGCCGATCGTGCCAGAGAGTACTGAACAGGGCTGGTATATCGACAAGTCGCGCGTTGATTTTCATCT
TGATCCCGTGCTGAATCAGTCGGTAGGCGGCCCGGAAAACTTCTATATGTATCAGTTGGGCGTAATGGGAACTGCGGATC
TGTGGGTCACGGATCATCTGCTCACCACGGGCAGCGTGTTTGCCAATATCGCCAACAACTACGACAAATTTAACTACACC
AATCCGCCGAAGGACTCGCATCTGCCGCGGGTGCGTACGCATGTCCGTGAGTATGTGCAGAATGATGTTTATGTGAATAA
CCTACAGGCCAACTACTTCCAGTATTTTGGCAATGGTTTCTATGGGCAGGTCTACGGTGGTTATCTGGAGACCATGTTTG
GCGGTGCCGGGGCGGAAGTCCTGTATCGCCCGGTAGACAGCAATTGGGCGTTTGGCCTGGATGCCAACTACGTGAAACAG
CGTGACTGGCGTAGCGCGCAGGATATGATGAAGTTTACCGATTACAGCGTGAAGACCGGACATTTGACCGCATACTGGAC
GCCGTCGTTCGCCCAGGATGTGCTGGTGAAAGCCAGCGTTGGTCAGTATCTGGCGGGCGATAAAGGCGGTACGCTGGAGA
TCGCCAAACGCTTCGATAGCGGCGTCGTTGTCGGCGGTTACGCGACGATTACCGATGCGTCGCCGGATGAATATGGGGAA
GGGGATTTTACCAAAGGCGTATATGTTTCCGTGCCGCTGGATATCTTCTCGTCCGGCCCAACCCGAAGTCGTGCGGCAAT
TGGCTGGACGCCGCTGACGCGTGACGGTGGTCAACAGCTTGGCCGTAAGTTTGGCCTGTATGATATGACCAGTGACAGGA
GCGTAAATTTCCGTTAA

Upstream 100 bases:

>100_bases
GCATTATTTTTGTCGGTTTTGCCGATTCCCTTTGGCGCGGCACGCCGGAGGCGATAAATGCCGACATTCTTCATACCCTG
ACGCAGCGGATACCGGAATA

Downstream 100 bases:

>100_bases
TACTCAGGCCGGATAAGGCGTTTACGGCGCTATCCGGCAAATTATCTTATTGAACAAAATATAAACATAAATAAAAAATA
TAGATGCCCGTCACATTTGT

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWMPQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGY
LGTSGNVSNPFCSYSDKFCSRDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQHSVVANQLTLLKYNAGLADP
KIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGIRTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLA
QKRVEPIVPESTEQGWYIDKSRVDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEVLYRPVDSNWAFGLDANYVKQ
RDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGE
GDFTKGVYVSVPLDIFSSGPTRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR

Sequences:

>Translated_698_residues
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWMPQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGY
LGTSGNVSNPFCSYSDKFCSRDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQHSVVANQLTLLKYNAGLADP
KIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGIRTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLA
QKRVEPIVPESTEQGWYIDKSRVDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEVLYRPVDSNWAFGLDANYVKQ
RDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGE
GDFTKGVYVSVPLDIFSSGPTRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR
>Mature_698_residues
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDNDQYRYYSASVQLFPWLETTL
RYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWMPQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGY
LGTSGNVSNPFCSYSDKFCSRDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQHSVVANQLTLLKYNAGLADP
KIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGIRTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLA
QKRVEPIVPESTEQGWYIDKSRVDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEVLYRPVDSNWAFGLDANYVKQ
RDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGE
GDFTKGVYVSVPLDIFSSGPTRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymcA [H]

Homologues:

Organism=Escherichia coli, GI1790461, Length=698, Percent_Identity=92.2636103151863, Blast_Score=1364, Evalue=0.0,
Organism=Escherichia coli, GI1787219, Length=696, Percent_Identity=63.5057471264368, Blast_Score=942, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010344 [H]

Pfam domain/function: PF06082 DUF940 [H]

EC number: NA

Molecular weight: Translated: 78342; Mature: 78342

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWM
CCEEEEEEEEEEEECHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGYLGTSGNVSNPFCSYSDKFCS
CEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCHHHHC
RDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQ
CCCEEEEEEECEEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNAGLADPKIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGI
HHHHHCEEEEEEECCCCCCCEEEEECCEEEEECCCEEECCCCCCHHHHCCHHHHCCCCCC
RTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLAQKRVEPIVPESTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEC
SRVDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
CCCCEEECCHHHCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCC
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEE
LYRPVDSNWAFGLDANYVKQRDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGEGDFTKGVYVSVPLDIFSSGP
CHHHCCCCCCEEHHHHHCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR
CCCCEEECCCCCCCCHHHHHHHHCCCEECCCCCCCCCC
>Mature Secondary Structure
MKKTHLLSVLALGISAACHAETYPAPVGPSQSDFGGVGLLQTPTARMAREGEMSLNYRDN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCEEEEECCC
DQYRYYSASVQLFPWLETTLRYTDVRTKKYSSVESFSGDQTYKDKAFDVKLRLWEESYWM
CCEEEEEEEEEEEECHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCEEEEEEEEECCCCCC
PQVAVGARDIGGTGLFDAEYIVASKAWGPFDFSLGLGWGYLGTSGNVSNPFCSYSDKFCS
CEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCHHHHC
RDNSYKEAGSVDGSDMFHGPASLFGGVEYQTPWQPLRLKLEYEGNNYQQDFAGKLEQKSK
CCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCC
FNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFNDLRPAYHDNSRPQYRPQPQDAILQ
CCCEEEEEEECEEEEEEEEECCCEEEEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHHHH
HSVVANQLTLLKYNAGLADPKIQVKGDTLYVTGEQVKYRDSREGIVRANRIVMNDLPEGI
HHHHHCEEEEEEECCCCCCCEEEEECCEEEEECCCEEECCCCCCHHHHCCHHHHCCCCCC
RTIRVTENRLNLPQVTTETDVASLKRHLEGEPLGHETPLAQKRVEPIVPESTEQGWYIDK
EEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEC
SRVDFHLDPVLNQSVGGPENFYMYQLGVMGTADLWVTDHLLTTGSVFANIANNYDKFNYT
CCCCEEECCHHHCCCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCC
NPPKDSHLPRVRTHVREYVQNDVYVNNLQANYFQYFGNGFYGQVYGGYLETMFGGAGAEV
CCCCCCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHCCCEEEEHHHHHHHHHHCCCCCEE
LYRPVDSNWAFGLDANYVKQRDWRSAQDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASV
EEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECCHHHHHHHHHHHH
GQYLAGDKGGTLEIAKRFDSGVVVGGYATITDASPDEYGEGDFTKGVYVSVPLDIFSSGP
CHHHCCCCCCEEHHHHHCCCCEEECCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHCCCC
TRSRAAIGWTPLTRDGGQQLGRKFGLYDMTSDRSVNFR
CCCCEEECCCCCCCCHHHHHHHHCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]