| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16767452
Identifier: 16767452
GI number: 16767452
Start: 4422817
End: 4423932
Strand: Reverse
Name: 16767452
Synonym: STM4202
Alternate gene names: NA
Gene position: 4423932-4422817 (Counterclockwise)
Preceding gene: 16767453
Following gene: 16767451
Centisome position: 91.08
GC content: 58.24
Gene sequence:
>1116_bases ATGGCGATAGCCGAACCCGACTTTATTGACCGCGACCCCGCGCAAATCACCAGCGAGATGATTGCGCAATATGAAGAAGC CAGCGGTAAAAAACTCTACCCGGCGCAGGCTGAGCGGCTGCTCATTGACCTGTTTGCTTATCGTGAAAACCTTGTCCGCA TCGCCATCCAGGAGGCAGCGAAGCAAAACCTGGTCGCGTATTCCCGTGCGCCGATGCTGGATTATTTAGGCGAGCTGGTT GGCGTTCACCGTCTGCCCGCTCAGGCGGCAAAAACCACGCTGCAGTTTTCTGTTACTCAAGCGGCTAAAAGTAACCTGGT GATTCCACAGGGTACCCGCGCCAGCGCGTCGGATAGCGTGATGTTCGCCACCGACGAAGATGTTCTGTTGCCTGCGGGCA GCCTGAGCGTTGCGGTAACTGCAACCTGTGTAGTGACCGGTGAACCCGGCAACAACTGGCAGCCTGCGCAAATCAGCGCG CTGGTAGACCGCGTGGGCAATTACGATATCAGCGTCACCAATCTGACGGCCTCAAGTGGCGGCTGCGGCGAAGAGAACGA CGACGCGCTACGTAAACGCATCCAGCTAGCGCCGGAAAGTTTCAGCAACGCGGGCAGCTATGGCGCCTATCGCTTCCATA CGCTCTCGGTCAGCCAGTCGATTATCGACGTGGCGGTACTGGGGCCGGATGAAGGGCTGGCGGAAGGCTGCGTGGAACTC TATCCGCTGACCCTGAACGGTCTGCCGGGGCCGGAGCTTCTTGCCCAGATCGAACGGGAGGTGAGCAAAGAGAAAAAGCG CCCGCTAACCGATAAGGTGAGCGCTAAATGTTCTCCGCGCGTGGCTTATCAGATCAGCGCCCGGCTGACGCTGTTTACCA CCGCCGATCAGGAGACGACGCTTGCCGCCGCGCGTGAAGCGATTAATACATGGACGCGCTCGCGCCAGACCCGGCTGGGC CAGGACATTGTGCCAAACCAGATAATTAAAGTGCTACAAGTGGATGGCGTTTACGACGTCGCGCTGGATATGCCCGCGAA AAAGGTATTGCAGGCGCACGAATGGGCGGAATGTACGGCTATTGACGTGACGATTGCCGGAGTCAGCGATGGATAA
Upstream 100 bases:
>100_bases GCCGGTTGCTGAAGGTGACGCCGACGATTGACGGCGAACACCTGACGTTACGCGTGCAATGGCGCGCCGCAGACGGCGTA ATTAACTCAACGGAGGTGTT
Downstream 100 bases:
>100_bases ACTGCTTCTGCCGCCGCCGCTGGCCAGCGACGAACGTTTCTCAATTCTGGCGAACATTGCCGCCGAACGTTTCGCGCAAA TCGACCTGACGGCGTTGCTG
Product: phage baseplate protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate Protein; Phage Baseplate J-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly-Like Protein; Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Phage Baseplate Assembly Protein GpJ; Phage Tail Protein; Pyocin R2_PP Baseplate/Tail Fiber Protein; Prophage; Phage Baseplate-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELV GVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISA LVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVEL YPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLG QDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
Sequences:
>Translated_371_residues MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELV GVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISA LVDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVEL YPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLG QDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG >Mature_370_residues AIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAAKQNLVAYSRAPMLDYLGELVG VHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSVMFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISAL VDRVGNYDISVTNLTASSGGCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVELY PLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETTLAAAREAINTWTRSRQTRLGQ DIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTAIDVTIAGVSDG
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39968; Mature: 39836
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH KQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSV HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHEEEEHHHHHCCEECCCCCCCCCCCCE MFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSG EEECCCCEEECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCC GCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVEL CCCCCCHHHHHHHHHCCCHHHCCCCCCCCEEEEEEEHHHCEEEEEEECCCCCHHHHHHEE YPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETT EEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEEEEEEEEECCCHHH LAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEE IDVTIAGVSDG EEEEEEECCCC >Mature Secondary Structure AIAEPDFIDRDPAQITSEMIAQYEEASGKKLYPAQAERLLIDLFAYRENLVRIAIQEAA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH KQNLVAYSRAPMLDYLGELVGVHRLPAQAAKTTLQFSVTQAAKSNLVIPQGTRASASDSV HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHEEEEHHHHHCCEECCCCCCCCCCCCE MFATDEDVLLPAGSLSVAVTATCVVTGEPGNNWQPAQISALVDRVGNYDISVTNLTASSG EEECCCCEEECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCC GCGEENDDALRKRIQLAPESFSNAGSYGAYRFHTLSVSQSIIDVAVLGPDEGLAEGCVEL CCCCCCHHHHHHHHHCCCHHHCCCCCCCCEEEEEEEHHHCEEEEEEECCCCCHHHHHHEE YPLTLNGLPGPELLAQIEREVSKEKKRPLTDKVSAKCSPRVAYQISARLTLFTTADQETT EEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEEEEEEEEECCCHHH LAAAREAINTWTRSRQTRLGQDIVPNQIIKVLQVDGVYDVALDMPAKKVLQAHEWAECTA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCEEE IDVTIAGVSDG EEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA