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The map label for this gene is yjaH [H]

Identifier: 16767425

GI number: 16767425

Start: 4386993

End: 4387685

Strand: Direct

Name: yjaH [H]

Synonym: STM4171

Alternate gene names: 16767425

Gene position: 4386993-4387685 (Clockwise)

Preceding gene: 16767424

Following gene: 16767427

Centisome position: 90.32

GC content: 55.27

Gene sequence:

>693_bases
GTGAACAGTTTTATCGAAGGGGCTCATCAGCCCCTTTTGTCTGTCTGGCGTCGCGCGTTTCTGTTTTCTGGCGCGCTGTT
GCTGACTGCCTGCAGTCATAACGCTTCACCGCCTCCGTTTACTGCCAGCGGCTTTGCCGGCGATCACGGCGCGGTGCGTA
TCTGGCGTAAAGATACGAACGATGAAGTCCATCTGCTTTCTGTTTTTAGCCCGTGGCATAGCGGCAGCACGACGACCAGC
GAATATCGTTGGCAGGGTGATACGCTTTCGCTTATTGAACTCAATATTTACAGCAAACCGCCAGAACATATTCGCGCGCG
TTTCGACGCTCATGGCGAACTCAGTTTTATGCAGCGTGAAGTCGGGGGGCAGAAGCAGCAGCTTTCCAACGATCAGATTG
CCTTGTATCGCTATCGCGCCGAACAAATCCGTCAGACCAGCGACGCCTTGCGCCTGGGGCGGGTCATACTACGCCAGGGA
CGCTGGCACGCCGACCATACGGTAACCACCTGTGAAGGTGAAACGCTGAAACCGGATCTGGATTCCTGGGCAATAAGCCA
CATTGAGCGCCGCCAGAACCACTCATCGGTAGAGGTGAGCGTAGCATGGCTGGAGGCGCCGGAAGGATCGCAACTTTTGC
TGGTGGCGAATTCAGATTTTTGTCACTGGCAGCCGCAAGCGAAAAGCTTTTGA

Upstream 100 bases:

>100_bases
ACCCACAGACCGGTAAAGAAATCAAAATCGCCGCCGCTAACGTACCGGCGTTTGTTTCTGGTAAAGCTCTGAAAGACGCA
GTTAAGTAAGACGCATAACT

Downstream 100 bases:

>100_bases
TGGAATACCGGATGGCGAAGCCGCCATTCGGCAAACATGCTTTACCAGTTTCCCATACCCATGTGACCGCCGCCGCGATG
ATAACCGCCGCCATAGCCGC

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNSFIEGAHQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTNDEVHLLSVFSPWHSGSTTTS
EYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQREVGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQG
RWHADHTVTTCEGETLKPDLDSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKSF

Sequences:

>Translated_230_residues
MNSFIEGAHQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTNDEVHLLSVFSPWHSGSTTTS
EYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQREVGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQG
RWHADHTVTTCEGETLKPDLDSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKSF
>Mature_230_residues
MNSFIEGAHQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTNDEVHLLSVFSPWHSGSTTTS
EYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQREVGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQG
RWHADHTVTTCEGETLKPDLDSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790434, Length=231, Percent_Identity=77.0562770562771, Blast_Score=376, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010858
- InterPro:   IPR012640
- InterPro:   IPR016500 [H]

Pfam domain/function: PF07356 DUF1481; PF08139 VirB [H]

EC number: NA

Molecular weight: Translated: 26060; Mature: 26060

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFIEGAHQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTN
CCCHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
DEVHLLSVFSPWHSGSTTTSEYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQRE
CCEEEEEEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHH
VGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQGRWHADHTVTTCEGETLKPDL
HCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCH
DSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKSF
HHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCEECCCCCCCC
>Mature Secondary Structure
MNSFIEGAHQPLLSVWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVRIWRKDTN
CCCHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCC
DEVHLLSVFSPWHSGSTTTSEYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQRE
CCEEEEEEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCHHHHHHHCCCCCCHHHHHHH
VGGQKQQLSNDQIALYRYRAEQIRQTSDALRLGRVILRQGRWHADHTVTTCEGETLKPDL
HCCHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCH
DSWAISHIERRQNHSSVEVSVAWLEAPEGSQLLLVANSDFCHWQPQAKSF
HHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]