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The map label for this gene is yiiR [H]

Identifier: 16767349

GI number: 16767349

Start: 4291842

End: 4292270

Strand: Direct

Name: yiiR [H]

Synonym: STM4083

Alternate gene names: 16767349

Gene position: 4291842-4292270 (Clockwise)

Preceding gene: 16767346

Following gene: 16767354

Centisome position: 88.36

GC content: 55.71

Gene sequence:

>429_bases
ATGACCATACAGCAATGGTTATTCTCATTTAAAGGGCGTATCGGACGCCGTGATTTCTGGATTTGGATCGGCCTCTGGTT
TGCCGGGATGCTGGCGCTATTTTCGCTGGCGGGGAAAAACCTGCTTGATATCCAAACGGCGGCATTTTGCCTGGTGTGCC
TGCTGTGGCCGACCGCCGCCGTCATGGTCAAACGTCTGCATGACCGGGGACGTTCCGGCGCGTGGGCGTTGCTGATGATT
CTGGCGTGGATGCTGCTGGCCGGAAACTGGGTGATGCTGCCGGGGATGTGGCAGTGGGTCGTCGGGCGATTTATTCCGAC
GCTGATCCTGGTGATGATGCTTATCGATCTGGGCGCGTTTGTCGGTGTTCAGGGGGAAAATAAGTTTGGGAAAGCGACAC
AGGACGTGAAGTTTAAAGCAGAACCGTAA

Upstream 100 bases:

>100_bases
CAATCTTACCTTTCGTTAGGACTGCTCACGATTAAAACGATAACTGTCGGGCTTGTCAAAAGGGTAAACTGTAGCGGAAG
GCAAAATATAAGGAACTTAC

Downstream 100 bases:

>100_bases
ACGGGCGGTAAACCGTAATTTGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGATTGGTGATGATTTGCAGGCCGGATA
AGCCCCAGCCGCCATTCGGT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLALFSLAGKNLLDIQTAAFCLVCLLWPTAAVMVKRLHDRGRSGAWALLMI
LAWMLLAGNWVMLPGMWQWVVGRFIPTLILVMMLIDLGAFVGVQGENKFGKATQDVKFKAEP

Sequences:

>Translated_142_residues
MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLALFSLAGKNLLDIQTAAFCLVCLLWPTAAVMVKRLHDRGRSGAWALLMI
LAWMLLAGNWVMLPGMWQWVVGRFIPTLILVMMLIDLGAFVGVQGENKFGKATQDVKFKAEP
>Mature_141_residues
TIQQWLFSFKGRIGRRDFWIWIGLWFAGMLALFSLAGKNLLDIQTAAFCLVCLLWPTAAVMVKRLHDRGRSGAWALLMIL
AWMLLAGNWVMLPGMWQWVVGRFIPTLILVMMLIDLGAFVGVQGENKFGKATQDVKFKAEP

Specific function: Unknown

COG id: COG3152

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790355, Length=141, Percent_Identity=90.0709219858156, Blast_Score=261, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008523 [H]

Pfam domain/function: PF05656 DUF805 [H]

EC number: NA

Molecular weight: Translated: 16147; Mature: 16016

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLALFSLAGKNLLDIQTAAFCLVCLLWPTAA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VMVKRLHDRGRSGAWALLMILAWMLLAGNWVMLPGMWQWVVGRFIPTLILVMMLIDLGAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGVQGENKFGKATQDVKFKAEP
HCCCCCCCCCCCCCCCEECCCC
>Mature Secondary Structure 
TIQQWLFSFKGRIGRRDFWIWIGLWFAGMLALFSLAGKNLLDIQTAAFCLVCLLWPTAA
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VMVKRLHDRGRSGAWALLMILAWMLLAGNWVMLPGMWQWVVGRFIPTLILVMMLIDLGAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGVQGENKFGKATQDVKFKAEP
HCCCCCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]