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The map label for this gene is yiiQ [H]

Identifier: 16767348

GI number: 16767348

Start: 4291145

End: 4291741

Strand: Reverse

Name: yiiQ [H]

Synonym: STM4082

Alternate gene names: 16767348

Gene position: 4291741-4291145 (Counterclockwise)

Preceding gene: 16767350

Following gene: 16767347

Centisome position: 88.35

GC content: 51.76

Gene sequence:

>597_bases
ATGAAGCCAGGATGTACTCTGTTTTTACTGTTGTTTTCTGCTCTCACCGCCAGCATAACGGCGCACGCGCAGCTCTCTTC
ATCGACCACGACAGCGCCCTATCTGCTGGCGGGCTCGCCAACCTTTGATCTTTCTATTAGCCAGTTTCGTGAGAACTTTA
ACCGCCAGAATCCCGATCTGCCGCTCAATGAATTTCGCGCCATTGAGAATAGCCGCGATAAGGCGAATCTGACCCGCGCC
GCCAGTAAGATTAACGAAAATCTGTATGCCTCCACGGCGCTGGAGCGCGGTACGCTCAAAGTGAAAAGTATGCAGATTAC
CTGGCTGCCCATTCAGGGGCCGGAACAGAAAGCGGCGAAAGCGAAAGCGCTGGAATATATGGCCGCCATTATTCGCACTG
TCGCCCCGTTACTGACAAAAGAGCAAAGCCAGAAAAAACTGCAAAAGATGCTTATCGCCGGTAAAGGTAAACACTATTAC
GCCGAGACCGAAGGCGCGGTACGTTATGTTGTCGCAGATAACGGCGAAAAGGGGCTGACCTTCGCGGTTGAACCGATTAA
GCTGACGTTATCTGAAAATCTGGAAGGGGCGAATTGA

Upstream 100 bases:

>100_bases
GTAAGTTCCTTATATTTTGCCTTCCGCTACAGTTTACCCTTTTGACAAGCCCGACAGTTATCGTTTTAATCGTGAGCAGT
CCTAACGAAAGGTAAGATTG

Downstream 100 bases:

>100_bases
TGACAAAAAGCAAAGCCTTTCCGGGGATGAATCTCTATACTGTTTCACAGACCATGCTGCTCTGACGAGCGGCCATCTTC
CTTAATTCGCTGACTAAGCG

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKPGCTLFLLLFSALTASITAHAQLSSSTTTAPYLLAGSPTFDLSISQFRENFNRQNPDLPLNEFRAIENSRDKANLTRA
ASKINENLYASTALERGTLKVKSMQITWLPIQGPEQKAAKAKALEYMAAIIRTVAPLLTKEQSQKKLQKMLIAGKGKHYY
AETEGAVRYVVADNGEKGLTFAVEPIKLTLSENLEGAN

Sequences:

>Translated_198_residues
MKPGCTLFLLLFSALTASITAHAQLSSSTTTAPYLLAGSPTFDLSISQFRENFNRQNPDLPLNEFRAIENSRDKANLTRA
ASKINENLYASTALERGTLKVKSMQITWLPIQGPEQKAAKAKALEYMAAIIRTVAPLLTKEQSQKKLQKMLIAGKGKHYY
AETEGAVRYVVADNGEKGLTFAVEPIKLTLSENLEGAN
>Mature_198_residues
MKPGCTLFLLLFSALTASITAHAQLSSSTTTAPYLLAGSPTFDLSISQFRENFNRQNPDLPLNEFRAIENSRDKANLTRA
ASKINENLYASTALERGTLKVKSMQITWLPIQGPEQKAAKAKALEYMAAIIRTVAPLLTKEQSQKKLQKMLIAGKGKHYY
AETEGAVRYVVADNGEKGLTFAVEPIKLTLSENLEGAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790354, Length=198, Percent_Identity=81.3131313131313, Blast_Score=335, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009918 [H]

Pfam domain/function: PF07305 DUF1454 [H]

EC number: NA

Molecular weight: Translated: 21706; Mature: 21706

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGCTLFLLLFSALTASITAHAQLSSSTTTAPYLLAGSPTFDLSISQFRENFNRQNPDL
CCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCC
PLNEFRAIENSRDKANLTRAASKINENLYASTALERGTLKVKSMQITWLPIQGPEQKAAK
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHH
AKALEYMAAIIRTVAPLLTKEQSQKKLQKMLIAGKGKHYYAETEGAVRYVVADNGEKGLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCE
FAVEPIKLTLSENLEGAN
EEEEEEEEEEECCCCCCC
>Mature Secondary Structure
MKPGCTLFLLLFSALTASITAHAQLSSSTTTAPYLLAGSPTFDLSISQFRENFNRQNPDL
CCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCC
PLNEFRAIENSRDKANLTRAASKINENLYASTALERGTLKVKSMQITWLPIQGPEQKAAK
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHH
AKALEYMAAIIRTVAPLLTKEQSQKKLQKMLIAGKGKHYYAETEGAVRYVVADNGEKGLT
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCE
FAVEPIKLTLSENLEGAN
EEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]