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The map label for this gene is azlC [H]

Identifier: 16767307

GI number: 16767307

Start: 4252099

End: 4252758

Strand: Reverse

Name: azlC [H]

Synonym: STM4042

Alternate gene names: 16767307

Gene position: 4252758-4252099 (Counterclockwise)

Preceding gene: 16767309

Following gene: 16767306

Centisome position: 87.55

GC content: 57.27

Gene sequence:

>660_bases
ATGAAACACTATTTTTCCTGTCTCAAGGGAGACACGATAAAAGCGATATTTTTAGTGTGCCTGGCCGTGGGCGTCGTCGG
CATGTCCTATGGCTCACTGGCGATGGCCTACGGTTTCCCACTGTGGGTGCCGTTTGTCCTCTCTATTTTTGTGCTGGCGG
GCGCGTCCGAATTTATGTTTATCGGCATTGTTGCCAGCGGCGGCAATCCGTTAGCGGCGGCGGCGGCAGGACTGCTGGTG
AATGCGCGCCACGTGCCGTTTGGCGTAACGGTGCGCGATTTGGTTGGCACCCGCGCCGCCAGCTTTTTCGGCTGCCATAT
TATGAATGATGAGAGCGTGGTGTTCGGCCTGTCGCAAAAAACACCCGAACAACGTAAAGCCGCCTACTGGCTATGCGGTC
TGGGCGTCGCCCTATTCTGGCCGATTGGCACACTGATTGGCGCTGGTGTCGGCAAACTGCTTCCGGCCCCAGAAACCATC
GGTCTGGATGCCGTATTCCCGGCAATCTTACTGGCGCTGGTGATCCCGGCGTTTAAAAACCGCACCACATTGATTCGTGG
TTGCAGCGGCGCCGCGCTGTCGCTTGCCGCCGTTCCTTTTGTGGCTGCCGGATTGCCGGTGTTGCTTTCGCTGCTTGGCC
TACTGGCGAGGAAAAAATAA

Upstream 100 bases:

>100_bases
AAAGCATCCAACGTTCACTATAACGAACGAAATGTTCGTCTTGTAAAGCAAATCTGTTCCGTTCATTATAATGAAAATTC
GTTCGATATGACTAAAGAAG

Downstream 100 bases:

>100_bases
TGGGCAATATGACGCTATTTATTATCGGTATTGCTCTTTTGTCTGCGGGAACCTATTTGATGCGCCTCGGCGGCGCGAAA
CTTGGCAGCCGTCTGGCGCT

Product: branched-chain amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMFIGIVASGGNPLAAAAAGLLV
NARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQKTPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETI
GLDAVFPAILLALVIPAFKNRTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK

Sequences:

>Translated_219_residues
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMFIGIVASGGNPLAAAAAGLLV
NARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQKTPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETI
GLDAVFPAILLALVIPAFKNRTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK
>Mature_219_residues
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMFIGIVASGGNPLAAAAAGLLV
NARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQKTPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETI
GLDAVFPAILLALVIPAFKNRTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK

Specific function: Involved in branched-chain amino acid transport [H]

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 22766; Mature: 22766

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMF
CCHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
IGIVASGGNPLAAAAAGLLVNARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQK
EEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEECCCC
TPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETIGLDAVFPAILLALVIPAFKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
RTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK
CCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHYFSCLKGDTIKAIFLVCLAVGVVGMSYGSLAMAYGFPLWVPFVLSIFVLAGASEFMF
CCHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE
IGIVASGGNPLAAAAAGLLVNARHVPFGVTVRDLVGTRAASFFGCHIMNDESVVFGLSQK
EEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCEEEECCCC
TPEQRKAAYWLCGLGVALFWPIGTLIGAGVGKLLPAPETIGLDAVFPAILLALVIPAFKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
RTTLIRGCSGAALSLAAVPFVAAGLPVLLSLLGLLARKK
CCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377 [H]