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The map label for this gene is yihP [H]

Identifier: 16767283

GI number: 16767283

Start: 4227237

End: 4228619

Strand: Reverse

Name: yihP [H]

Synonym: STM4018

Alternate gene names: 16767283

Gene position: 4228619-4227237 (Counterclockwise)

Preceding gene: 16767284

Following gene: 16767282

Centisome position: 87.05

GC content: 52.64

Gene sequence:

>1383_bases
ATGAGTCAAACATCATCGAATCCGGCAACCCTACGCTTGCCGTTTAAAGAAAAACTTGCCTATGGACTGGGGGATTTAGG
TTCTAATATCCTGTTAGATATCGGAACCCTCTATTTACTCAAATTTTATACCGATGTGCTGGGTTTACCAGGGACTTACG
GCGGGATCATTTTCCTGATCGCCAAATTTTTTACCGCATTTACCGATATGGGTACCGGCATTATGCTCGACTCGCGGCGT
AAAATTGGTCCGAAGGGCAAATTCCGCCCGTTCGTGCTTTACGCGGCATTTCCGGTAACGCTACTGGCGATTGCTAACTT
TGTCGGCACACCGTTTGAGGTGACGGGAAAAACCGTCGTCGCAACGATGCTGTTTATGCTGTACGGGCTGGTTTTCAGCA
TGATGAACTGCTCGTATGGCGCGATGGTACCCGCGATTACCAAGAACCCGGATGAACGCGCCTCGCTTGCCGCCTGGCGT
CAGGGCGGCGCCACTCTCGGCCTGCTGCTGTGTACCGTTGGCTTTGTGCCGGTCATGAACCTGATCGAAGGCAATGCCCA
ACTCAGCTATATTTTCGCCGCCACGCTATTTTCATTGTTTGGCCTGCTATTTATGTGGCTGTGCTACGCCGGCGTTAAAG
AGCGCTACGTCGAAGTGAAACCTGTCGATAGCGCGCAAAAGCCTGGATTATTGCAGTCGTTCCGCGCCATCGCCGGTAAC
CGTCCGCTGTTTATTCTGTGTATCGCCAACCTTTGTACTCTTGGCGCCTTCAACGTCAAACTGGCGATTCAGGTTTATTA
CACCCAGTACGTTCTTAACGACCCGATCCTCCTCTCCTGGATGGGCTTCTTTAGCATGGGCTGTATTTTTATCGGCGTTT
TTTTGATGCCCGGCGCTGTAAGGCGTTTTGGCAAGAAGAAAGTCTATATCGGCGGGCTGTTAATATGGGTGGCAGGCGAT
CTGCTCAACTACTTCTTTGGCGGCGGCTCGGTCAGTTTTGTCGCCTTCTCCTGCCTGGCGTTCTTCGGTTCCGCCTTCGT
CAACAGCCTGAACTGGGCGCTGGTTTCCGACACGGTGGAGTACGGTGAATGGCGCACCGGCGTCCGCTCGGAAGGGACGG
TTTACACCGGCTTCACGTTCTTCCGTAAGGTCTCCCAGGCGCTGGCAGGGTTCTTCCCCGGCTGGATGCTAACGCAAATC
GGTTATATCCCGAATGTGGTGCAATCGGCAGGCACCGTCGAAGGCCTACGCCAGTTGATCTTTATTTATCCTTGCGTGCT
GGCGGTCATCACCATTATTGCGATGGGCTGTTTCTACAACCTCAACGAGAAGATGTACGTGCGAATTGTGGAAGAGATTG
AGGCCCGGAAACATACGGTTTAA

Upstream 100 bases:

>100_bases
CTATCGCGCGAAGAGCGAGTGGGCTTCACTTTTTGCTTCTTTACGGAATATCTAATACGGCTCGCCCGCAGGGAAACCTG
CGGGCAGATGGAGAAGAATA

Downstream 100 bases:

>100_bases
CAACAATAAAATATAACGCCCTGCGGGGCGTTTTGAGAGGCGATTATGTCTAATCATGATCCGCTAACGCTAAAGTTGAG
CCTGCGGGAAAAATGCGCCT

Product: GPH family transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSQTSSNPATLRLPFKEKLAYGLGDLGSNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLIAKFFTAFTDMGTGIMLDSRR
KIGPKGKFRPFVLYAAFPVTLLAIANFVGTPFEVTGKTVVATMLFMLYGLVFSMMNCSYGAMVPAITKNPDERASLAAWR
QGGATLGLLLCTVGFVPVMNLIEGNAQLSYIFAATLFSLFGLLFMWLCYAGVKERYVEVKPVDSAQKPGLLQSFRAIAGN
RPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSWMGFFSMGCIFIGVFLMPGAVRRFGKKKVYIGGLLIWVAGD
LLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQI
GYIPNVVQSAGTVEGLRQLIFIYPCVLAVITIIAMGCFYNLNEKMYVRIVEEIEARKHTV

Sequences:

>Translated_460_residues
MSQTSSNPATLRLPFKEKLAYGLGDLGSNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLIAKFFTAFTDMGTGIMLDSRR
KIGPKGKFRPFVLYAAFPVTLLAIANFVGTPFEVTGKTVVATMLFMLYGLVFSMMNCSYGAMVPAITKNPDERASLAAWR
QGGATLGLLLCTVGFVPVMNLIEGNAQLSYIFAATLFSLFGLLFMWLCYAGVKERYVEVKPVDSAQKPGLLQSFRAIAGN
RPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSWMGFFSMGCIFIGVFLMPGAVRRFGKKKVYIGGLLIWVAGD
LLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQI
GYIPNVVQSAGTVEGLRQLIFIYPCVLAVITIIAMGCFYNLNEKMYVRIVEEIEARKHTV
>Mature_459_residues
SQTSSNPATLRLPFKEKLAYGLGDLGSNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLIAKFFTAFTDMGTGIMLDSRRK
IGPKGKFRPFVLYAAFPVTLLAIANFVGTPFEVTGKTVVATMLFMLYGLVFSMMNCSYGAMVPAITKNPDERASLAAWRQ
GGATLGLLLCTVGFVPVMNLIEGNAQLSYIFAATLFSLFGLLFMWLCYAGVKERYVEVKPVDSAQKPGLLQSFRAIAGNR
PLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSWMGFFSMGCIFIGVFLMPGAVRRFGKKKVYIGGLLIWVAGDL
LNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVEYGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIG
YIPNVVQSAGTVEGLRQLIFIYPCVLAVITIIAMGCFYNLNEKMYVRIVEEIEARKHTV

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI145693206, Length=456, Percent_Identity=91.4473684210526, Blast_Score=859, Evalue=0.0,
Organism=Escherichia coli, GI48994989, Length=455, Percent_Identity=65.2747252747253, Blast_Score=625, Evalue=1e-180,
Organism=Escherichia coli, GI1787902, Length=458, Percent_Identity=33.4061135371179, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI87082306, Length=454, Percent_Identity=29.0748898678414, Blast_Score=171, Evalue=9e-44,
Organism=Escherichia coli, GI1786466, Length=420, Percent_Identity=28.0952380952381, Blast_Score=169, Evalue=3e-43,
Organism=Escherichia coli, GI1790561, Length=446, Percent_Identity=26.6816143497758, Blast_Score=132, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 50634; Mature: 50502

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00872 NA_GALACTOSIDE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTSSNPATLRLPFKEKLAYGLGDLGSNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLI
CCCCCCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFVLYAAFPVTLLAIANFVGTPFEVTGKTVV
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEECCHHHH
ATMLFMLYGLVFSMMNCSYGAMVPAITKNPDERASLAAWRQGGATLGLLLCTVGFVPVMN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LIEGNAQLSYIFAATLFSLFGLLFMWLCYAGVKERYVEVKPVDSAQKPGLLQSFRAIAGN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHCC
RPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSWMGFFSMGCIFIGVFLMPGAV
CCEEEHHHHHHHHCCCCCEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH
RRFGKKKVYIGGLLIWVAGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVE
HHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYIPNVVQSAGTVEGLRQLI
HHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
FIYPCVLAVITIIAMGCFYNLNEKMYVRIVEEIEARKHTV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQTSSNPATLRLPFKEKLAYGLGDLGSNILLDIGTLYLLKFYTDVLGLPGTYGGIIFLI
CCCCCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
AKFFTAFTDMGTGIMLDSRRKIGPKGKFRPFVLYAAFPVTLLAIANFVGTPFEVTGKTVV
HHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEECCHHHH
ATMLFMLYGLVFSMMNCSYGAMVPAITKNPDERASLAAWRQGGATLGLLLCTVGFVPVMN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LIEGNAQLSYIFAATLFSLFGLLFMWLCYAGVKERYVEVKPVDSAQKPGLLQSFRAIAGN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHCC
RPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSWMGFFSMGCIFIGVFLMPGAV
CCEEEHHHHHHHHCCCCCEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHH
RRFGKKKVYIGGLLIWVAGDLLNYFFGGGSVSFVAFSCLAFFGSAFVNSLNWALVSDTVE
HHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
YGEWRTGVRSEGTVYTGFTFFRKVSQALAGFFPGWMLTQIGYIPNVVQSAGTVEGLRQLI
HHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
FIYPCVLAVITIIAMGCFYNLNEKMYVRIVEEIEARKHTV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]