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The map label for this gene is ybhA [H]

Identifier: 16767275

GI number: 16767275

Start: 4219262

End: 4219996

Strand: Reverse

Name: ybhA [H]

Synonym: STM4010

Alternate gene names: 16767275

Gene position: 4219996-4219262 (Counterclockwise)

Preceding gene: 16767276

Following gene: 16767272

Centisome position: 86.88

GC content: 47.35

Gene sequence:

>735_bases
ATGCGATATCGTTTAATCGCTTTTGATCTTGATGGAACGCTGCTAAACCGTAATAAACAAATTCTGCCAGAGTCGCTAAC
CGCCATCCGTCAGATGCAGGACATGGGCTGCCGAATAATGCTTGTCACCGGCCGCTCTCATCGTGAAGCCTATGCGTATT
ATCAAACGCTGGCGCTCACCGAACCGATGATCTGTTGTAACGGAAGCTATATTTATCAACCGGCTCAACAGCAGATCCTT
CACCCGCTGCCGCTGACGCACTTACAAACGGAAAAAATACTGGCGCGGGTATATCCGCTTAAACCGACAATTCGTGCTGA
TGATAAAATAATCTTTCAGGCTGATGAGCTAAGCAGTAGGGAGAATATCTGGCAAATCAGCATCGTTCATCGGCACATAA
AACAACTACAAAATATTGCTGAGTTTATACAGCATGAATTACATCTAAGCTGTACCTGGTCCTGGCATCATCAACTGGAT
ATTCTCCAGAAGGGGTGTAGCAAAGGACAAAGCCTCGCCAGATATGCACAGCAACAGCATATCGCAATGCGCGAAGTGAT
GGCGTTTGGCGATAATGATAACGATGCGGAAATGCTACGTTTAGCCGGATTGGGCGTCGCGATGGGGAATGCCAGCGCTC
GGGCAAAGGTGTATGCGGATAGCGTCATTGGTCGGCATAATACGCCAGCGATTGCTGATTTTTTGGCAACCTTATCCCTT
TCTCAACGTGAATAA

Upstream 100 bases:

>100_bases
AGGCAAAGCAATGCCACTGTTTTCTCGCTTATCAGCACCGTCTCGATATTCCATTGCTGAATCACCTGGATGCCTCACGC
TGTTTTAGGATCGGACGCTC

Downstream 100 bases:

>100_bases
AAAAACCCCGCCGAGCTTTCATTTCGGCAGGGTTTTTATCCGTAAGAGCGTTAATTACTCTTCTTTCTGACCACGGTTCG
CACGGCGGCGATCGTTTTCC

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALTEPMICCNGSYIYQPAQQQIL
HPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSRENIWQISIVHRHIKQLQNIAEFIQHELHLSCTWSWHHQLD
ILQKGCSKGQSLARYAQQQHIAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPAIADFLATLSL
SQRE

Sequences:

>Translated_244_residues
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALTEPMICCNGSYIYQPAQQQIL
HPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSRENIWQISIVHRHIKQLQNIAEFIQHELHLSCTWSWHHQLD
ILQKGCSKGQSLARYAQQQHIAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPAIADFLATLSL
SQRE
>Mature_244_residues
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALTEPMICCNGSYIYQPAQQQIL
HPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSRENIWQISIVHRHIKQLQNIAEFIQHELHLSCTWSWHHQLD
ILQKGCSKGQSLARYAQQQHIAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPAIADFLATLSL
SQRE

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates pyridoxalphosphate and erythrose 4-phosphate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=267, Percent_Identity=37.4531835205993, Blast_Score=178, Evalue=3e-46,
Organism=Escherichia coli, GI2367265, Length=251, Percent_Identity=26.6932270916335, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 27867; Mature: 27867

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALT
CCEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC
EPMICCNGSYIYQPAQQQILHPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSR
CCEEEECCCEEECCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCC
ENIWQISIVHRHIKQLQNIAEFIQHELHLSCTWSWHHQLDILQKGCSKGQSLARYAQQQH
CCEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHH
IAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPAIADFLATLSL
HHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCHHEEEHHHHCCCCCCHHHHHHHHHHHC
SQRE
CCCC
>Mature Secondary Structure
MRYRLIAFDLDGTLLNRNKQILPESLTAIRQMQDMGCRIMLVTGRSHREAYAYYQTLALT
CCEEEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHC
EPMICCNGSYIYQPAQQQILHPLPLTHLQTEKILARVYPLKPTIRADDKIIFQADELSSR
CCEEEECCCEEECCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHCCCC
ENIWQISIVHRHIKQLQNIAEFIQHELHLSCTWSWHHQLDILQKGCSKGQSLARYAQQQH
CCEEEHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHH
IAMREVMAFGDNDNDAEMLRLAGLGVAMGNASARAKVYADSVIGRHNTPAIADFLATLSL
HHHHHHHHCCCCCCHHHHHHHHHCCEEECCCCCHHEEEHHHHCCCCCCHHHHHHHHHHHC
SQRE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7665460; 8564363; 8905232; 9278503 [H]