| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16767250
Identifier: 16767250
GI number: 16767250
Start: 4186117
End: 4186830
Strand: Direct
Name: 16767250
Synonym: STM3980
Alternate gene names: NA
Gene position: 4186117-4186830 (Clockwise)
Preceding gene: 16767249
Following gene: 16767251
Centisome position: 86.18
GC content: 40.76
Gene sequence:
>714_bases ATGAAATTTAAATATGCTTTAACTTCTCTCGCATTATCTGTTGCAATTTTGTCATCAGTACCTTCTACTGCTTTCGCCAT CGGCGGCGCCAGCGGCGCTAAAGTGGACTATCAGGTCCAGGGAAAAATTGGCGAAGTTGTTATGAACCCCTATGATATCG CGCCGCTAACCGCCGTTATTCGTAATGGCGGTTACCAGTTACGTGACGTGCATGTACGGATTGTACCCAAAGAAAATGGC CAGGAGATCGCGTATAAAGTTAATAATAAATACCTTTTAACGTATGGCGGTATTCCCGTCTTTGGTCTTTACCCGGATTA TGTCAATACCGTTGAAGTTGAATATACAAGTATCCAGGGTAGTAAAACCGAAAATGTAAAAGAAAGCTATAAAATGTATG CACCGCCTGCCTATATTGAATCAGCGGGTACAAAAGAAGAACAATCAGCACTCTTTACTATCGATGTTAAAAAGGTTTCC CCAGAATTTAAAGATCGCTTGTATCTTTTGAATAATACGAAAGATAAGTCTGGGAATGGAACGCGTACTGTCTGGAACAA CCCTACTGGGGGTGCATTAGAATGGAACTTCACTACAGCTAACGCTATTATCGACACCTCCGGTGATATTCGTTGGTTTA TGAATCCAAGTTCAATTTATGATTTAAAGTCAATTTATCGTGCTGGCGTTATGATGGGCTTTAAACAAAACTAG
Upstream 100 bases:
>100_bases GGCTATCAATAAAAATAGTTAATTATATATGCTTCATTTATTTTTATAAAAGAAACATAAAATGGAAAGTTAGTTATTTA TTTATAAGATGGAGAGTGTT
Downstream 100 bases:
>100_bases GATGGCGCACTATCGTGGGGCTACGGTCAGCGTTATGTGAAATACGATATCATGGGGCGTGAAATCTTTAACCGCCGCCT GCCGGATAATTATAACGATT
Product: outer membrane protein
Products: NA
Alternate protein names: Arylsulfate Sulfotransferase; Fructose-Bisphosphate Aldolase; Outer Membrane Protein; Arylsulfate Sulfotransferase Degenerate; Arylsulfatase
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKFKYALTSLALSVAILSSVPSTAFAIGGASGAKVDYQVQGKIGEVVMNPYDIAPLTAVIRNGGYQLRDVHVRIVPKENG QEIAYKVNNKYLLTYGGIPVFGLYPDYVNTVEVEYTSIQGSKTENVKESYKMYAPPAYIESAGTKEEQSALFTIDVKKVS PEFKDRLYLLNNTKDKSGNGTRTVWNNPTGGALEWNFTTANAIIDTSGDIRWFMNPSSIYDLKSIYRAGVMMGFKQN
Sequences:
>Translated_237_residues MKFKYALTSLALSVAILSSVPSTAFAIGGASGAKVDYQVQGKIGEVVMNPYDIAPLTAVIRNGGYQLRDVHVRIVPKENG QEIAYKVNNKYLLTYGGIPVFGLYPDYVNTVEVEYTSIQGSKTENVKESYKMYAPPAYIESAGTKEEQSALFTIDVKKVS PEFKDRLYLLNNTKDKSGNGTRTVWNNPTGGALEWNFTTANAIIDTSGDIRWFMNPSSIYDLKSIYRAGVMMGFKQN >Mature_237_residues MKFKYALTSLALSVAILSSVPSTAFAIGGASGAKVDYQVQGKIGEVVMNPYDIAPLTAVIRNGGYQLRDVHVRIVPKENG QEIAYKVNNKYLLTYGGIPVFGLYPDYVNTVEVEYTSIQGSKTENVKESYKMYAPPAYIESAGTKEEQSALFTIDVKKVS PEFKDRLYLLNNTKDKSGNGTRTVWNNPTGGALEWNFTTANAIIDTSGDIRWFMNPSSIYDLKSIYRAGVMMGFKQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26190; Mature: 26190
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKYALTSLALSVAILSSVPSTAFAIGGASGAKVDYQVQGKIGEVVMNPYDIAPLTAVI CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCEEEEEECCCCCHHHHHHH RNGGYQLRDVHVRIVPKENGQEIAYKVNNKYLLTYGGIPVFGLYPDYVNTVEVEYTSIQG HCCCEEEEEEEEEEEECCCCCEEEEEECCEEEEEECCEEEEEECCCCCCEEEEEEEEECC SKTENVKESYKMYAPPAYIESAGTKEEQSALFTIDVKKVSPEFKDRLYLLNNTKDKSGNG CCCCCHHHHHEECCCCHHHHCCCCCCCCCEEEEEEEECCCCCHHCEEEEEECCCCCCCCC TRTVWNNPTGGALEWNFTTANAIIDTSGDIRWFMNPSSIYDLKSIYRAGVMMGFKQN CEEEECCCCCCEEEEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure MKFKYALTSLALSVAILSSVPSTAFAIGGASGAKVDYQVQGKIGEVVMNPYDIAPLTAVI CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCEEEEEECCCCCHHHHHHH RNGGYQLRDVHVRIVPKENGQEIAYKVNNKYLLTYGGIPVFGLYPDYVNTVEVEYTSIQG HCCCEEEEEEEEEEEECCCCCEEEEEECCEEEEEECCEEEEEECCCCCCEEEEEEEEECC SKTENVKESYKMYAPPAYIESAGTKEEQSALFTIDVKKVSPEFKDRLYLLNNTKDKSGNG CCCCCHHHHHEECCCCHHHHCCCCCCCCCEEEEEEEECCCCCHHCEEEEEECCCCCCCCC TRTVWNNPTGGALEWNFTTANAIIDTSGDIRWFMNPSSIYDLKSIYRAGVMMGFKQN CEEEECCCCCCEEEEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA