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The map label for this gene is yigC [H]

Identifier: 16767248

GI number: 16767248

Start: 4183598

End: 4185076

Strand: Direct

Name: yigC [H]

Synonym: STM3978

Alternate gene names: 16767248

Gene position: 4183598-4185076 (Clockwise)

Preceding gene: 308065944

Following gene: 16767249

Centisome position: 86.13

GC content: 53.82

Gene sequence:

>1479_bases
ATGGACGCCATGAAATATCACGATTTACGCGACTTCCTGACGCTACTTGAGCAGCAGGGGGAACTAAAACGCATCACGCT
ACCTGTGGATCCTCATCTGGAAATCACGGAAATCGCTGACCGCACGCTGCGTGCCGGTGGACCGGCGTTGCTGTTTGAAA
ATCCTAAAGGTTACGCCATGCCGGTGCTGTGCAACCTTTTTGGCACGCCAAAACGCGTGGCGATGGGCATGGGGCAGGAT
GATGTTTCCGCCTTACGGGAAGTGGGTAAATTATTAGCGTTTCTTAAAGAACCTGAGCCGCCGAAAGGCTTTCGCGATCT
GTTTGACAAGCTGCCGCAGTTTAAGCAAGTGCTGAATATGCCGACGAAACGGTTACGCGGCGCGCCTTGCCAGCAGAAAA
TCGCGTCTGGCGATGATGTCGATTTAACGCGTCTTCCTGTCATGACCTGTTGGCCGGACGACGCCGCGCCGCTGATTACC
TGGGGACTGACGGTAACGCGTGGTCCGCACAAAGAGCGGCAAAACCTGGGCATTTATCGTCAGCAGTTGATAGGTAAAAA
TAAGCTGATTATGCGCTGGCTGTCTCACCGCGGCGGCGCGCTGGATTTTCAGGAGTGGTTAGCCGCGCGTCCGGGTGAAC
GTTTCCCGGTCTCCGTCGCATTGGGCGCCGATCCGGCGACGATACTTGGCGCCGTGACTCCTGTTCCCGATACTCTGTCG
GAGTATGCCTTTGCGGGCCTGCTGCGCGGCACGAAAACTGAAGTGGTTAAATGCCTTTCTAACGATCTGGAAGTGCCTGC
CAGCGCCGAGATTATCCTTGAAGGTTACATTGAGCCGGGAGAGATGGCGCCGGAAGGACCGTATGGCGATCATACGGGCT
ATTATAATGAAGTGGATAGCTTTCCGGTCTTTACCGTCACGCATATTACACAGCGTGAGGATGCCATCTATCACTCCACC
TATACCGGGCGTCCGCCCGATGAGCCTGCGGTATTAGGGGTGGCGCTCAATGAAGTCTTCGTGCCTATTCTGCAAAAACA
GTTTCCGGAAATCGTCGACTTTTATCTGCCGCCGGAAGGGTGTTCTTACCGCCTGGCGGTAGTGACGATGAAAAAGCAGT
ACGCTGGTCATGCGAAACGCGTCATGATGGGCGTCTGGTCGTTTTTGCGCCAGTTTATGTATACGAAATTTGTTATCGTT
TGCGATGATGACGTTAACGCACGCGACTGGAATGATGTGATCTGGGCGATTACCACCCGTATGGACCCTGCACGGGATAC
GGTGCTGGTTGAAAATACGCCGATTGATTACCTGGATTTTGCCTCGCCGGTCTCCGGGCTGGGTTCAAAAATGGGGCTGG
ATGCCACAAACAAATGGCCGGGCGAAACCCAACGCGAGTGGGGTCGTCCTATTGTTAAAGATCCTGAAGTTACCGCGCGT
ATTGATGCGATTTGGGATGAGCTGGCTATCTTTAAATAA

Upstream 100 bases:

>100_bases
TCTGGATTAGCGTTGGTTGCCAGAGTTCACGCTAATTTAACAAAAATACAGCATCCCGATGATGAACGCCGTATAATGAT
GCGCTTACCAAGAGGCTACA

Downstream 100 bases:

>100_bases
CTGAAAGCGGACATCGACATTTCAGGCTGCGGCGACTCAGCTTGAAAAATGTCGGTATTGACCCGACACCCGACAGAGGG
AGCGCATGACAACCTTAAGC

Product: 3-octaprenyl-4-hydroxybenzoate decarboxylase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MDAMKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYAMPVLCNLFGTPKRVAMGMGQD
DVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIASGDDVDLTRLPVMTCWPDDAAPLIT
WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWLAARPGERFPVSVALGADPATILGAVTPVPDTLS
EYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHST
YTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIV
CDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIVKDPEVTAR
IDAIWDELAIFK

Sequences:

>Translated_492_residues
MDAMKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYAMPVLCNLFGTPKRVAMGMGQD
DVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIASGDDVDLTRLPVMTCWPDDAAPLIT
WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWLAARPGERFPVSVALGADPATILGAVTPVPDTLS
EYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHST
YTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIV
CDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIVKDPEVTAR
IDAIWDELAIFK
>Mature_492_residues
MDAMKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYAMPVLCNLFGTPKRVAMGMGQD
DVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIASGDDVDLTRLPVMTCWPDDAAPLIT
WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWLAARPGERFPVSVALGADPATILGAVTPVPDTLS
EYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHST
YTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIV
CDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIVKDPEVTAR
IDAIWDELAIFK

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=492, Percent_Identity=95.7317073170732, Blast_Score=980, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=448, Percent_Identity=26.3392857142857, Blast_Score=141, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 55135; Mature: 55135

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAMKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYAM
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCH
PVLCNLFGTPKRVAMGMGQDDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNM
HHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
PTKRLRGAPCQQKIASGDDVDLTRLPVMTCWPDDAAPLITWGLTVTRGPHKERQNLGIYR
CHHHHCCCCHHHHHCCCCCCCEEECCEEEECCCCCCCEEEECEEECCCCCHHHHHHHHHH
QQLIGKNKLIMRWLSHRGGALDFQEWLAARPGERFPVSVALGADPATILGAVTPVPDTLS
HHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCHHHH
EYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDS
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
FPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG
CCEEEEEEECCCCCCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
CSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTR
CCEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEEEC
MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIVKDPEVTAR
CCCCCCEEEEECCCCCHHHHHCHHHHCCHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHH
IDAIWDELAIFK
HHHHHHHHHHCC
>Mature Secondary Structure
MDAMKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYAM
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCH
PVLCNLFGTPKRVAMGMGQDDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNM
HHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
PTKRLRGAPCQQKIASGDDVDLTRLPVMTCWPDDAAPLITWGLTVTRGPHKERQNLGIYR
CHHHHCCCCHHHHHCCCCCCCEEECCEEEECCCCCCCEEEECEEECCCCCHHHHHHHHHH
QQLIGKNKLIMRWLSHRGGALDFQEWLAARPGERFPVSVALGADPATILGAVTPVPDTLS
HHHHCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCCCCHHHH
EYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDS
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
FPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEG
CCEEEEEEECCCCCCEEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCC
CSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTR
CCEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCEEEEEEEC
MDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIVKDPEVTAR
CCCCCCEEEEECCCCCHHHHHCHHHHCCHHCCCCCCCCCCCCCHHHHCCCCCCCCCHHHH
IDAIWDELAIFK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA