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The map label for this gene is yieP [H]

Identifier: 16767172

GI number: 16767172

Start: 4098947

End: 4099651

Strand: Reverse

Name: yieP [H]

Synonym: STM3888

Alternate gene names: 16767172

Gene position: 4099651-4098947 (Counterclockwise)

Preceding gene: 308065951

Following gene: 16767171

Centisome position: 84.4

GC content: 51.21

Gene sequence:

>705_bases
ATGCCTTTAAGCGCACAACAATTAGCCGCACAGAAAAATCTATCCTATGTTCTGGCTGAAAAGCTGGCGCAGCGGATATT
AAAGGGTGACTACGCCCCCGGTACGATTCTTCCCGGCGAAATAGAACTGGGCGAGCAGTACGGCGTAAGTCGAACGGCAG
TTCGCGAAGCGGTGAAAACGTTGACGGCTAAAGGTATGGTGCTACCTCGTCCGCGCATTGGTACGCGGGTGATGCCGCAG
GGAAACTGGAACTTTCTGGATCAAGAGCTGCTGACCTGGTGGATGACGGAAGAAAATTTTCATCAGGTGGTAGAGCATTT
TCTGGTGATGCGTATTAGCCTGGAGCCGCAAGCCTGCCTGCTGGCGGCGACTCTTGGCACACCGGAGCAGAAAGCGCGGC
TTAATGCCTTAATGGAAGAGATGGTCGCGCTGAAAAAGCATTTTAAGCGTGAACGCTGGATTGAAGTGGATATGGCGTGG
CACGAGCATATCTACGAAATGAGCGCCAATCCCTTTCTAATCTCTTTTGCGACGCTATTTCATTCGGTTTATCACACTTA
CTTTACCTCAATCACCTATAACGAGGTGGTAAAGCTGGATTTGCACCAGGCCATTGTTGATGCCATCGCTGATGGCGACG
GCGAACGCGCTTTCCAGGCCTGCCAGGCGTTGTTAATAGCGCCCAATGAGAGACCAGATAATTAA

Upstream 100 bases:

>100_bases
TTAACGTGCCATAAAATAAGCAAATTGCCGTTATTGCAACTGCAATCACACTTCCAGGTGGCATACTAATAACCAAACGA
AAGAGAAAGGAAGAACATTC

Downstream 100 bases:

>100_bases
CAGGATATTGAATGACCAGCAAAAAAGCGCGCAGTATGGCTGGCCTGCCGTGGATCGCGGCGATGGCCTTCTTTATGCAG
GCGCTAGACGCCACCATTTT

Product: regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPLSAQQLAAQKNLSYVLAEKLAQRILKGDYAPGTILPGEIELGEQYGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQ
GNWNFLDQELLTWWMTEENFHQVVEHFLVMRISLEPQACLLAATLGTPEQKARLNALMEEMVALKKHFKRERWIEVDMAW
HEHIYEMSANPFLISFATLFHSVYHTYFTSITYNEVVKLDLHQAIVDAIADGDGERAFQACQALLIAPNERPDN

Sequences:

>Translated_234_residues
MPLSAQQLAAQKNLSYVLAEKLAQRILKGDYAPGTILPGEIELGEQYGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQ
GNWNFLDQELLTWWMTEENFHQVVEHFLVMRISLEPQACLLAATLGTPEQKARLNALMEEMVALKKHFKRERWIEVDMAW
HEHIYEMSANPFLISFATLFHSVYHTYFTSITYNEVVKLDLHQAIVDAIADGDGERAFQACQALLIAPNERPDN
>Mature_233_residues
PLSAQQLAAQKNLSYVLAEKLAQRILKGDYAPGTILPGEIELGEQYGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQG
NWNFLDQELLTWWMTEENFHQVVEHFLVMRISLEPQACLLAATLGTPEQKARLNALMEEMVALKKHFKRERWIEVDMAWH
EHIYEMSANPFLISFATLFHSVYHTYFTSITYNEVVKLDLHQAIVDAIADGDGERAFQACQALLIAPNERPDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=230, Percent_Identity=86.0869565217391, Blast_Score=420, Evalue=1e-119,
Organism=Escherichia coli, GI48994955, Length=214, Percent_Identity=29.4392523364486, Blast_Score=104, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26636; Mature: 26505

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSAQQLAAQKNLSYVLAEKLAQRILKGDYAPGTILPGEIELGEQYGVSRTAVREAVKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHH
LTAKGMVLPRPRIGTRVMPQGNWNFLDQELLTWWMTEENFHQVVEHFLVMRISLEPQACL
HHHCCEECCCCCCCCEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHE
LAATLGTPEQKARLNALMEEMVALKKHFKRERWIEVDMAWHEHIYEMSANPFLISFATLF
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCHHHHHHHHH
HSVYHTYFTSITYNEVVKLDLHQAIVDAIADGDGERAFQACQALLIAPNERPDN
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PLSAQQLAAQKNLSYVLAEKLAQRILKGDYAPGTILPGEIELGEQYGVSRTAVREAVKT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCHHHHHHHHHHH
LTAKGMVLPRPRIGTRVMPQGNWNFLDQELLTWWMTEENFHQVVEHFLVMRISLEPQACL
HHHCCEECCCCCCCCEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHE
LAATLGTPEQKARLNALMEEMVALKKHFKRERWIEVDMAWHEHIYEMSANPFLISFATLF
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCHHHHHHHHH
HSVYHTYFTSITYNEVVKLDLHQAIVDAIADGDGERAFQACQALLIAPNERPDN
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]