| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16767147
Identifier: 16767147
GI number: 16767147
Start: 4072743
End: 4073441
Strand: Reverse
Name: 16767147
Synonym: STM3863
Alternate gene names: NA
Gene position: 4073441-4072743 (Counterclockwise)
Preceding gene: 16767148
Following gene: 16767146
Centisome position: 83.86
GC content: 50.21
Gene sequence:
>699_bases ATGTCATTTCAGCCATCCTTTGCGGGTCCACAACCCGACTCAAGGATTGATCGTACTACCTTTATTCGTCGTGCTTATCT TCATCTCGCCGTCGCCATCGTCGGTTTTATCGTATTGAGCGCGGCGTGGAGTTTTATAGGGGTCGGGGAGTATGCGCTTG ATGTGCTGCTGGCTGGTGGAAGATATAGCTGGTTGGTTGTTCTCGGCGCTTTTATGCTGGTGGGAATGCTGGCGACCCGT CTGGCGGATAATGCGGGGAATAATCAAACGCAACTTATCGGGCTGGGGATTTATGTGTTGGCAGAATCCCTGATTTTTGC CCCCCTGTTAACGGTGGCGGCGTATATTAACCCGTCGAGCATTGGCGCGGCGGCAATAACGACTCTGTTGCTGGTCGGCG GCCTGACGTTTACCGCTTTTTCTATAAAAAAAGACTTTTCTTTTCTGCGCTCGTTTCTGACTATGGCTGGGTTCATTGCT TTTGGCGCGATTATTGCCAGCGTCATCTGCGGCTTCTCGCTGGGCGTCTGGTTTTCTGCGCTAATGGTACTGCTGTGCGC CGGGTTTATACTTTACGATACTTCTAACATTATTCACCATTACCCTACCGATCGCCCTGCTGGCGCGGCATTACATCTGT TTGCTTCTATCGCGACCATGTTCTGGTATATTTTGCGGATTTTTATGTCGCGTAATTAA
Upstream 100 bases:
>100_bases GTTTTCATTAAATCCTTCTTTCTGTCATTGGCATCTGCACATTGTGCGAAGAAGGGAGGAATGGATGCGTTTTTATTGCA TAAAATGAGGGATTATTACT
Downstream 100 bases:
>100_bases GTAAAAAATACGCGCAACGGAAAACCAGCGGCCTCTGTCGCTGGTTTTTGCTTTTCTGACTCCCCTGCGCTTTATTACGT TATCTTCTTTATTTATGGAG
Product: permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSFQPSFAGPQPDSRIDRTTFIRRAYLHLAVAIVGFIVLSAAWSFIGVGEYALDVLLAGGRYSWLVVLGAFMLVGMLATR LADNAGNNQTQLIGLGIYVLAESLIFAPLLTVAAYINPSSIGAAAITTLLLVGGLTFTAFSIKKDFSFLRSFLTMAGFIA FGAIIASVICGFSLGVWFSALMVLLCAGFILYDTSNIIHHYPTDRPAGAALHLFASIATMFWYILRIFMSRN
Sequences:
>Translated_232_residues MSFQPSFAGPQPDSRIDRTTFIRRAYLHLAVAIVGFIVLSAAWSFIGVGEYALDVLLAGGRYSWLVVLGAFMLVGMLATR LADNAGNNQTQLIGLGIYVLAESLIFAPLLTVAAYINPSSIGAAAITTLLLVGGLTFTAFSIKKDFSFLRSFLTMAGFIA FGAIIASVICGFSLGVWFSALMVLLCAGFILYDTSNIIHHYPTDRPAGAALHLFASIATMFWYILRIFMSRN >Mature_231_residues SFQPSFAGPQPDSRIDRTTFIRRAYLHLAVAIVGFIVLSAAWSFIGVGEYALDVLLAGGRYSWLVVLGAFMLVGMLATRL ADNAGNNQTQLIGLGIYVLAESLIFAPLLTVAAYINPSSIGAAAITTLLLVGGLTFTAFSIKKDFSFLRSFLTMAGFIAF GAIIASVICGFSLGVWFSALMVLLCAGFILYDTSNIIHHYPTDRPAGAALHLFASIATMFWYILRIFMSRN
Specific function: Unknown
COG id: COG0670
COG function: function code R; Integral membrane protein, interacts with FtsH
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25056; Mature: 24925
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFQPSFAGPQPDSRIDRTTFIRRAYLHLAVAIVGFIVLSAAWSFIGVGEYALDVLLAGG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RYSWLVVLGAFMLVGMLATRLADNAGNNQTQLIGLGIYVLAESLIFAPLLTVAAYINPSS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IGAAAITTLLLVGGLTFTAFSIKKDFSFLRSFLTMAGFIAFGAIIASVICGFSLGVWFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMVLLCAGFILYDTSNIIHHYPTDRPAGAALHLFASIATMFWYILRIFMSRN HHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFQPSFAGPQPDSRIDRTTFIRRAYLHLAVAIVGFIVLSAAWSFIGVGEYALDVLLAGG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RYSWLVVLGAFMLVGMLATRLADNAGNNQTQLIGLGIYVLAESLIFAPLLTVAAYINPSS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IGAAAITTLLLVGGLTFTAFSIKKDFSFLRSFLTMAGFIAFGAIIASVICGFSLGVWFSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMVLLCAGFILYDTSNIIHHYPTDRPAGAALHLFASIATMFWYILRIFMSRN HHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA