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The map label for this gene is torC [H]

Identifier: 16767108

GI number: 16767108

Start: 4023353

End: 4024537

Strand: Reverse

Name: torC [H]

Synonym: STM3823

Alternate gene names: 16767108

Gene position: 4024537-4023353 (Counterclockwise)

Preceding gene: 16767110

Following gene: 16767107

Centisome position: 82.85

GC content: 52.91

Gene sequence:

>1185_bases
ATGCGAAAACTCTGGAGAGCGCTACTCAGGCCAAGCGCCCGTTGGTCGATACTGGCGCTGGTCATTGTCGGGATTGTGAT
CGGCGTTGCGCTGATCGTGTTACCTCACGTCGGTATCAAACTGACCAGTACGACAGAGTTTTGCGTCAGCTGCCATAGTA
TGCAGCCGGTGTATCAGGAATATAAACAGTCCGTACATTTCCAGAACGCTTCCGGCGTACGCGCGGAATGCCACGATTGC
CATATCCCCCCTGATATTCCAGGCATGGTGAAACGTAAGCTGGAAGCCAGCAACGATCTTTACCAGACATTTATCGCCCA
CTCGATTGATACCCCGGAAAAATTTGAAGCCAAACGCGCCGAGCTTGCCGAGCGTGAATGGGCGCGCATGAAAGAGAATA
ACTCCGCGACCTGTCGTTCCTGCCATAACTACGATGCGATGGATCACGCGAAACAGAACCCGGAAGCGGCGCGGCAAATG
AAAATCGCCGCGAAAGAAAATCAATCCTGCATCGACTGCCATAAAGGGATTGCCCACCAGCTACCGGATATGAGCAGCGG
TTTCCGCAAACAGTTTGATGAACTGCGCGCCAGCGCCAGTACGCATAATGACGGCGATACGCTCTATTCGCTGGATATCA
AGCCGATTTACGCCGCTAAAGGCGATAAAGAACCGGCAGGTTCGCTGTTACCTGCTTCTGAAGTGAAAGTCCTTAAACGG
GACGGTGACTGGCTGCAAGTGCAAATCGAAGGCTGGACGGAGACGGACGGTCGCCAGCGCGTGCTGACGCAGTTGCCCGG
TAAACGTATTTTTGTCGCCTCGATTCGCGGCGATGTGCAACAGCATGTGAAAACGCTGGAAGAGACCACCGTCGCGGCGA
CCAATACTCAGTGGAGCAAATTACAGGCAACTGCGTGGATGCAAAAAGGCGACATGGTAAATGACATTAAACCGATTTGG
GCCTATGCCGACTCCCTCTATAACGGCACCTGTAATCAGTGTCACGGCGCGCCGGACAAAGCGCACTTTGACGCTAACGG
CTGGATCGGCACGCTCAACGGCATGATCGGTTTCACCAGTCTGGATAAGCGTGAAGAACGTACCTTGTTGAAATATCTCC
AGATGAATGCGTCTGATACCACCAACACGCCGCACAGCGATAAGGGAGAACACAATGAAAAATAA

Upstream 100 bases:

>100_bases
TGTTCATATATTGCCGTATCCCGTTCATCCTGACCAGTGACGCTGTTCATATTTGCGGAATAAGATCTGCGCATTAAACC
ATATAATTACAGGGGCTATT

Downstream 100 bases:

>100_bases
GGACTCGTTACACGTCTCTCGTCGACGTTTTCTGGCGCAGCTTGGCGGCTTGACGGTGGCAGGAATGCTGGGGCCGTCAC
TACTGACGCCCCGTAGCGCC

Product: trimethylamine N-oxide reductase cytochrome c-like subunit

Products: H2O; trimethylamine; NAD [C]

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MRKLWRALLRPSARWSILALVIVGIVIGVALIVLPHVGIKLTSTTEFCVSCHSMQPVYQEYKQSVHFQNASGVRAECHDC
HIPPDIPGMVKRKLEASNDLYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQNPEAARQM
KIAAKENQSCIDCHKGIAHQLPDMSSGFRKQFDELRASASTHNDGDTLYSLDIKPIYAAKGDKEPAGSLLPASEVKVLKR
DGDWLQVQIEGWTETDGRQRVLTQLPGKRIFVASIRGDVQQHVKTLEETTVAATNTQWSKLQATAWMQKGDMVNDIKPIW
AYADSLYNGTCNQCHGAPDKAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTTNTPHSDKGEHNEK

Sequences:

>Translated_394_residues
MRKLWRALLRPSARWSILALVIVGIVIGVALIVLPHVGIKLTSTTEFCVSCHSMQPVYQEYKQSVHFQNASGVRAECHDC
HIPPDIPGMVKRKLEASNDLYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQNPEAARQM
KIAAKENQSCIDCHKGIAHQLPDMSSGFRKQFDELRASASTHNDGDTLYSLDIKPIYAAKGDKEPAGSLLPASEVKVLKR
DGDWLQVQIEGWTETDGRQRVLTQLPGKRIFVASIRGDVQQHVKTLEETTVAATNTQWSKLQATAWMQKGDMVNDIKPIW
AYADSLYNGTCNQCHGAPDKAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTTNTPHSDKGEHNEK
>Mature_394_residues
MRKLWRALLRPSARWSILALVIVGIVIGVALIVLPHVGIKLTSTTEFCVSCHSMQPVYQEYKQSVHFQNASGVRAECHDC
HIPPDIPGMVKRKLEASNDLYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQNPEAARQM
KIAAKENQSCIDCHKGIAHQLPDMSSGFRKQFDELRASASTHNDGDTLYSLDIKPIYAAKGDKEPAGSLLPASEVKVLKR
DGDWLQVQIEGWTETDGRQRVLTQLPGKRIFVASIRGDVQQHVKTLEETTVAATNTQWSKLQATAWMQKGDMVNDIKPIW
AYADSLYNGTCNQCHGAPDKAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTTNTPHSDKGEHNEK

Specific function: Part of the anaerobic respiratory chain of trimethylamine-N-oxide reductase TorA. Acts by transferring electrons from the membranous menaquinones to TorA. This transfer probably involves an electron transfer pathway from menaquinones to the N-terminal dom

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TorC/TorY family [H]

Homologues:

Organism=Escherichia coli, GI1787230, Length=390, Percent_Identity=90, Blast_Score=749, Evalue=0.0,
Organism=Escherichia coli, GI1788181, Length=373, Percent_Identity=33.2439678284182, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI1788530, Length=186, Percent_Identity=48.9247311827957, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009154
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 44200; Mature: 44200

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLWRALLRPSARWSILALVIVGIVIGVALIVLPHVGIKLTSTTEFCVSCHSMQPVYQE
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHH
YKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDLYQTFIAHSIDTPEKFEAKRA
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH
ELAEREWARMKENNSATCRSCHNYDAMDHAKQNPEAARQMKIAAKENQSCIDCHKGIAHQ
HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LPDMSSGFRKQFDELRASASTHNDGDTLYSLDIKPIYAAKGDKEPAGSLLPASEVKVLKR
CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHCC
DGDWLQVQIEGWTETDGRQRVLTQLPGKRIFVASIRGDVQQHVKTLEETTVAATNTQWSK
CCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHEECCCHHHH
LQATAWMQKGDMVNDIKPIWAYADSLYNGTCNQCHGAPDKAHFDANGWIGTLNGMIGFTS
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEECCCCCEEECCCCEECCC
LDKREERTLLKYLQMNASDTTNTPHSDKGEHNEK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKLWRALLRPSARWSILALVIVGIVIGVALIVLPHVGIKLTSTTEFCVSCHSMQPVYQE
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCCHHHHH
YKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDLYQTFIAHSIDTPEKFEAKRA
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH
ELAEREWARMKENNSATCRSCHNYDAMDHAKQNPEAARQMKIAAKENQSCIDCHKGIAHQ
HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LPDMSSGFRKQFDELRASASTHNDGDTLYSLDIKPIYAAKGDKEPAGSLLPASEVKVLKR
CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCHHHHHHHCC
DGDWLQVQIEGWTETDGRQRVLTQLPGKRIFVASIRGDVQQHVKTLEETTVAATNTQWSK
CCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHEECCCHHHH
LQATAWMQKGDMVNDIKPIWAYADSLYNGTCNQCHGAPDKAHFDANGWIGTLNGMIGFTS
HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCEECCCCCEEECCCCEECCC
LDKREERTLLKYLQMNASDTTNTPHSDKGEHNEK
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: trimethylamine-N-oxide; NADH [C]

Specific reaction: trimethylamine-N-oxide + NADH = H2O + trimethylamine + NAD [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]