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The map label for this gene is rmbA [H]

Identifier: 16767040

GI number: 16767040

Start: 3954069

End: 3954686

Strand: Direct

Name: rmbA [H]

Synonym: STM3756

Alternate gene names: 16767040

Gene position: 3954069-3954686 (Clockwise)

Preceding gene: 16767039

Following gene: 16767041

Centisome position: 81.4

GC content: 37.7

Gene sequence:

>618_bases
ATGATGAGAAAGCCTTCACAAATTGTCCATTGCATTAGTTGCGATTTATCCTGTCAATTATTTCCTGACAGCGCAGTACG
GGTGCAATACTGTCATAATGCGGCATTTTCCATCTGGCCAGATGGTAATGCTTTCCTGAAAAAAGGGTTTATTGAAAAGT
TATTGCTTGATAGACACAATCATTTATCCAGCGGTTTTATCTTTGTTGATTTTTCTTTCCCGAATCTTCGACGATTTACC
GATTTGCAATGGGCTGACAGTCTGGCAGACAGTGGCATGCATATTGTCCTGATTTCTGACAGAAGTTTAACTCCGCTGGC
CAATTACTGGATTTTGAAAAGCAATAAAATACAAGGGATTATTTATTCCGATGACGATGATATTGTGCAACAGCAAAAGA
TGCACCGCTTGTTTACCGGTCGGCTCGCCAACAGTAAACGTGGACGAACGCTTAACTATACGGAATTTATATTACTGAAG
CGCTTTGTATCAGGAATAAGTATTCAGCAGATTGTAAATATTGACAATATTGATATTAAGAAACTTTATGTGCATAAGCT
GCGGCTTGAAAATAAGCTAGGGCATAGCATTCATAAAATAATATCAAATATTTTATAG

Upstream 100 bases:

>100_bases
TTTCGCGACTTTTGACAGTCGTAGTACTTTATATTATCTGGATTGACACATTTATTTACCAATGAAATATTAATAGAAAC
ATCGACAGGAGTCGTTCAGG

Downstream 100 bases:

>100_bases
ATCCGTTTCCATTTTTATTATTTCCATATTATTGCGATGTGGAAGACGCTTTACGCCATAATGCAGGAGGCAGAATGCCA
ACTCCCCAAAATTACTCATT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFT
DLQWADSLADSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
RFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL

Sequences:

>Translated_205_residues
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFT
DLQWADSLADSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
RFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL
>Mature_205_residues
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFT
DLQWADSLADSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
RFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ykgK [H]

Homologues:

Organism=Escherichia coli, GI87082166, Length=190, Percent_Identity=39.4736842105263, Blast_Score=165, Evalue=2e-42,
Organism=Escherichia coli, GI2367106, Length=181, Percent_Identity=27.6243093922652, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 23702; Mature: 23702

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHN
CCCCHHHHEEEEECCCEEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCCC
HLSSGFIFVDFSFPNLRRFTDLQWADSLADSGMHIVLISDRSLTPLANYWILKSNKIQGI
CCCCCEEEEEECCCCCHHHHCHHHHHHHHCCCCEEEEECCCCCCCCHHEEEEECCCEEEE
IYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLKRFVSGISIQQIVNIDNIDIK
EECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCHH
KLYVHKLRLENKLGHSIHKIISNIL
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHN
CCCCHHHHEEEEECCCEEEECCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHCCC
HLSSGFIFVDFSFPNLRRFTDLQWADSLADSGMHIVLISDRSLTPLANYWILKSNKIQGI
CCCCCEEEEEECCCCCHHHHCHHHHHHHHCCCCEEEEECCCCCCCCHHEEEEECCCEEEE
IYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLKRFVSGISIQQIVNIDNIDIK
EECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCHH
KLYVHKLRLENKLGHSIHKIISNIL
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]