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The map label for this gene is yibP [H]

Identifier: 16766990

GI number: 16766990

Start: 3899118

End: 3900401

Strand: Direct

Name: yibP [H]

Synonym: STM3705

Alternate gene names: 16766990

Gene position: 3899118-3900401 (Clockwise)

Preceding gene: 16766989

Following gene: 16766991

Centisome position: 80.27

GC content: 59.03

Gene sequence:

>1284_bases
ATGAGGGGAAAGGCGATTAACACCATTCAACAGGCCGTGAAACCAAGAACGTTTTCAGTCAGGCCTTTGTTCTACGCCAG
CGTACTTAGCGCTGGCGTATTGTTGTGCGCCTTTTCCGCCCACGCGGATGACCGTGATCAACTCAAATCTATTCAGGCCG
ATATCGCCGCGAAAGAACGCGACGTACGCCAGCAGCAGCAACAACGCGCCAGCCTCCTGGCACAACTTAAAGCCCAGGAA
GAGGCCATCTCAGCCGCAGCACGTAAGCTGCGCGAAACGCAAAGCACCCTGGATCAGTTAAACGCGCAAATTGATGAGAT
GAACGCCTCAATTGCCAAACTGGAGCAGCAAAAAGCCAGCCAGGAGCGTAATCTTGCCGCGCAGTTGGACGCCGCTTTCC
GCCAGGGCGAACACACCGGCATTCAGCTTATTCTTAGCGGAGAAGAAAGCCAGCGTGGGCAACGCCTGCAGGCCTACTTC
GGCTATCTGAACCAGGCGCGCCAGGAGACTATCGCCGAGCTGAAACAGACTCGCGAACAGGTCGCCACGCAAAAAGCCGA
GCTGGAAGAGAAGCAAAGCCAACAACAAACGTTGCTGTATGAGCAGCGCGCCCAGCAGGCGAAGCTGGAACAGGCGCGTA
ATGAACGTAAGAAAACGCTTGCCGGACTGGAGTCGTCTATTCAGCAAGGCCAGCAACAGTTAAGCGAACTACGCGCCAAC
GAATCACGCCTACGCAACAGTATCGCGCGGGCGGAAGCGGCGGCCAAAGCGCGAGCGGAGCGTGAAGCCCGCGAAGCGCA
GGCGGTACGCGATAAGCAGCAGGAAGCCTCGCGTAAAGGCAGCACCTATAAGCCGACGGAAAGCGAGCGCTCGCTAATGT
CCCGCACCGGCGGTCTGGGCGCGCCTCGCGGTCAGGCATACTGGCCGGTACGCGGCCCGATCTTGCATCGCTATGGCGAA
CGGCTGCAGGGTGAGCTACGTTGGAAGGGGATGGTGATCGGCGCGTCGGAAGGCACCGAGGTCAAAGCCATCGCCGACGG
CAGGGTGATTCTGGCGGACTGGCTACAAGGCTATGGCCTGGTGGTGGTCGTAGAGCATGGTAAAGGCGATATGAGCCTTT
ACGGCTATAACCAGAGCGCGCTGGTCAGCGTAGGCGCGCAGGTGCGCGCCGGACAACCTATCGCCCTTGTGGGCAGTAGC
GGCGGTCAGGGCAGACCCTCGCTTTATTTCGAAATTCGTCGCCAGGGTCAGGCCGTCAATCCACAGCCGTGGTTGGGAAG
ATAA

Upstream 100 bases:

>100_bases
ACTTTCAGACATTGCGCCTACCATGCTGTCGCTGATGGGGATGGAAATCCCGCAAGAGATGACTGGTAAGCCGCTGTTCA
TCGTGGAATAATCCCTCCCC

Downstream 100 bases:

>100_bases
GTTTTGCCTCAGTTTCGTCGCTCCATTCTCACGCTGGCCACTTTGCTGGCGTTTGCACATCCCGTTTTCGCTGGCAAGCT
CGCCATCGTGATTGATGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKERDVRQQQQQRASLLAQLKAQE
EAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKASQERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
GYLNQARQETIAELKQTREQVATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLGAPRGQAYWPVRGPILHRYGE
RLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSS
GGQGRPSLYFEIRRQGQAVNPQPWLGR

Sequences:

>Translated_427_residues
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKERDVRQQQQQRASLLAQLKAQE
EAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKASQERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
GYLNQARQETIAELKQTREQVATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLGAPRGQAYWPVRGPILHRYGE
RLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSS
GGQGRPSLYFEIRRQGQAVNPQPWLGR
>Mature_427_residues
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKERDVRQQQQQRASLLAQLKAQE
EAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKASQERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYF
GYLNQARQETIAELKQTREQVATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLGAPRGQAYWPVRGPILHRYGE
RLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSS
GGQGRPSLYFEIRRQGQAVNPQPWLGR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=419, Percent_Identity=91.6467780429594, Blast_Score=733, Evalue=0.0,
Organism=Escherichia coli, GI1789099, Length=115, Percent_Identity=39.1304347826087, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87082174, Length=119, Percent_Identity=32.7731092436975, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 47298; Mature: 47298

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKER
CCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DVRQQQQQRASLLAQLKAQEEAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAELKQTREQ
HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
APRGQAYWPVRGPILHRYGERLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGL
CCCCCEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCEEHHHHHHCCCE
VVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVN
EEEEECCCCCEEEECCCCHHHHHHCCHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCC
PQPWLGR
CCCCCCC
>Mature Secondary Structure
MRGKAINTIQQAVKPRTFSVRPLFYASVLSAGVLLCAFSAHADDRDQLKSIQADIAAKER
CCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
DVRQQQQQRASLLAQLKAQEEAISAAARKLRETQSTLDQLNAQIDEMNASIAKLEQQKAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERNLAAQLDAAFRQGEHTGIQLILSGEESQRGQRLQAYFGYLNQARQETIAELKQTREQ
HHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATQKAELEEKQSQQQTLLYEQRAQQAKLEQARNERKKTLAGLESSIQQGQQQLSELRAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESRLRNSIARAEAAAKARAEREAREAQAVRDKQQEASRKGSTYKPTESERSLMSRTGGLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
APRGQAYWPVRGPILHRYGERLQGELRWKGMVIGASEGTEVKAIADGRVILADWLQGYGL
CCCCCEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCEEHHHHHHCCCE
VVVVEHGKGDMSLYGYNQSALVSVGAQVRAGQPIALVGSSGGQGRPSLYFEIRRQGQAVN
EEEEECCCCCEEEECCCCHHHHHHCCHHCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCC
PQPWLGR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]