| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16766936
Identifier: 16766936
GI number: 16766936
Start: 3836825
End: 3837364
Strand: Direct
Name: 16766936
Synonym: STM3650
Alternate gene names: NA
Gene position: 3836825-3837364 (Clockwise)
Preceding gene: 16766935
Following gene: 16766943
Centisome position: 78.99
GC content: 49.63
Gene sequence:
>540_bases ATGTCGAAATCATCATGGTTATTACTTTTGGGTTTATGCGCCAGCGGCTCCGCGCTTGCGGCATCCTCAGAATCCGCTTT TCTGGCGCAACATGGGCTGGCGGGAAAAACGGTTGAGCAGATCGTGGATACGATTGATCAGACGCCGCAGAGCCGTCCTT TGCCTTACTCCGCGTCGATTACCAGTACCGAACTCAAATTATCTGACGGAGAGCAGATTTATACGCTGCCGTTAGGCGAC AAATTCTATCTCTCTTTTGCGCCCTATGAATGGCGGACACACCCCTGTTTTAACCACAGCCTTTCCGGCTGTCAGGGAGA AATGCCGAATAAACCGTTCACTGTAAAAGTGACAGACAGTAAAGGCGCTGTCATCGTACAAAAAGAGATGCAAAGCTATC GAAACGGATTTATCGGTGTTTGGCTACCGCGCAATATGGAAGGGACGCTGGAAGTAAGCTACAACGGTAAAACGGCGTCA CATGCCATTGCCACCAGTGATGACAGCCAGACCTGTCTGACGGAATTACCATTACGTTAA
Upstream 100 bases:
>100_bases CCAGCATAACTTTGCATTACTTTACCCTGCGTCCCTTTGACCTTTCCCTTAGGGGAACCCCTATAGTAGGCAGGGAGATT GTTCACAAGGAATTGAAGTT
Downstream 100 bases:
>100_bases AAAAATGCCCGATAACATAATGGGTTATCGGGCCTATAAAACGCCAACAAGATAAAATTAACAGAGTGCCTTGAGAATGC ATAACGCCACAAGAATGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASITSTELKLSDGEQIYTLPLGD KFYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDSKGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTAS HAIATSDDSQTCLTELPLR
Sequences:
>Translated_179_residues MSKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASITSTELKLSDGEQIYTLPLGD KFYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDSKGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTAS HAIATSDDSQTCLTELPLR >Mature_178_residues SKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASITSTELKLSDGEQIYTLPLGDK FYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDSKGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTASH AIATSDDSQTCLTELPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19496; Mature: 19365
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASI CCCCCEEEEEEECCCCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC TSTELKLSDGEQIYTLPLGDKFYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDS EEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC KGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTASHAIATSDDSQTCLTELPLR CCEEEEHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCCHHHHCCCCC >Mature Secondary Structure SKSSWLLLLGLCASGSALAASSESAFLAQHGLAGKTVEQIVDTIDQTPQSRPLPYSASI CCCCEEEEEEECCCCCEEECCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC TSTELKLSDGEQIYTLPLGDKFYLSFAPYEWRTHPCFNHSLSGCQGEMPNKPFTVKVTDS EEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC KGAVIVQKEMQSYRNGFIGVWLPRNMEGTLEVSYNGKTASHAIATSDDSQTCLTELPLR CCEEEEHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCCCEEEECCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA