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The map label for this gene is yiaG [H]

Identifier: 16766934

GI number: 16766934

Start: 3835860

End: 3836150

Strand: Direct

Name: yiaG [H]

Synonym: STM3648

Alternate gene names: 16766934

Gene position: 3835860-3836150 (Clockwise)

Preceding gene: 16766932

Following gene: 16766935

Centisome position: 78.97

GC content: 45.36

Gene sequence:

>291_bases
ATGGAATATAAAGATCCGATGTTTGAGCTGCTGAGCAGCCTGGAACAAATTGTTTTTAAAGATGAAACGCGAAAGATCAC
CCTGACGCAAAAACCCAATCCTTTTACCGAATTTGAACAGTTACGGAGAGGAACGGGACTAAAAACAGATGAATTCGCCA
GAGCGCTGGGCGTAACGGTTGCCATGGTTCAGGAATGGGAATCGAAACGCGAAAAACCCACGCCAGCAGAGCTTAAATTA
ATGCGCCTGATACAGGCGAACCCACGCTTAAGTAAGCAATTGATGGAGTAA

Upstream 100 bases:

>100_bases
TCCTGGCGGCGCGTCGCCCCCCACCCGCAAGTTTCCCGACTATTCTTAAGAGGCTTCGATGCATTTCACGATCCCGCTGT
GTGATTTACAGGAGTTCTCA

Downstream 100 bases:

>100_bases
TTTTTACCCCTTTCTGTTTTTAACGGTCCTGCGTAAGGACCGTTTTCCCCGCCCGATTACTGGCCTGGAGAAATAAAGTA
AAATAAAAGTTGCATCGCCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MEYKDPMFELLSSLEQIVFKDETRKITLTQKPNPFTEFEQLRRGTGLKTDEFARALGVTVAMVQEWESKREKPTPAELKL
MRLIQANPRLSKQLME

Sequences:

>Translated_96_residues
MEYKDPMFELLSSLEQIVFKDETRKITLTQKPNPFTEFEQLRRGTGLKTDEFARALGVTVAMVQEWESKREKPTPAELKL
MRLIQANPRLSKQLME
>Mature_96_residues
MEYKDPMFELLSSLEQIVFKDETRKITLTQKPNPFTEFEQLRRGTGLKTDEFARALGVTVAMVQEWESKREKPTPAELKL
MRLIQANPRLSKQLME

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789978, Length=96, Percent_Identity=79.1666666666667, Blast_Score=157, Evalue=9e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11258; Mature: 11258

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYKDPMFELLSSLEQIVFKDETRKITLTQKPNPFTEFEQLRRGTGLKTDEFARALGVTV
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
AMVQEWESKREKPTPAELKLMRLIQANPRLSKQLME
HHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MEYKDPMFELLSSLEQIVFKDETRKITLTQKPNPFTEFEQLRRGTGLKTDEFARALGVTV
CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
AMVQEWESKREKPTPAELKLMRLIQANPRLSKQLME
HHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]