| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yhjN [H]
Identifier: 16766904
GI number: 16766904
Start: 3798531
End: 3800831
Strand: Reverse
Name: yhjN [H]
Synonym: STM3618
Alternate gene names: 16766904
Gene position: 3800831-3798531 (Counterclockwise)
Preceding gene: 16766905
Following gene: 16766903
Centisome position: 78.25
GC content: 56.89
Gene sequence:
>2301_bases ATGAAAAGAAAATTGTCCTGGATGTGTGCGGCGGTAATAGGATTAAGCGCGTTTCCTGCTTTCATGACGGCGGCGGCGCC TGCTACGCCGCCATTGATAAATGCTGAACCCACCGAGCCTGCGCCGTCGCCCGCAACTGAGGCGCCCGTCGTGGCGCAGA CCGCGCCTTCGCGCGAGGTCAAGCTGACCTTTGCGCAAATCGCGCCGCCGCCGGGTAGTATGGCGCTGCGTGGCGTTAAC CCTAACGGCGGCATTGAATTTGGTATGCGCAGCGATGAAGTGGCGTCGAAAGCGGTGCTGAATCTGGAATATACGCCCTC GCCGTCGCTCCTGCCGGTTCAGTCGCAGCTCAAGGTTTATCTCAATGATGAACTGATGGGCGTACTGCCGGTGACAAAAG AGCAGTTGGGGAAAAAGACGCTGGCGCAGGTACCTATCAATCCGCTATTTATCACCGACTTTAACCGGGTGCGGCTGGAG TTTGTCGGCCACTATCGCGACGTGTGTGAAAACCCGGCCAGCAGTACTCTGTGGTTAGACATCGGGCGAAATAGCGCCCT GGATCTGACCTATAACATGCTGGCGGTGAATAACGATCTGTCCCACTTCCCGGTGCCGTTTTTCGATCCGCGGGATAACC GTCCAGTGACGTTGCCGATAGTGTTTGCTGATATGCCGGATCTGGCGCAGCAGCAGGCGGCTTCTATTGTCGCGTCCTGG TTTGGATCGCGGGCGGGCTGGCGCGGTCAGCGCTTCCCGGTGTTGTATAATCACCTGCCGGATCGCAATGCGATCGTGTT CGCCACCAACGATCGACGCCCCGATTTCCTGCGCGATCATCCTGCGGTTAACGCGCCGGTTATCGAGATGATGAGCCATC CGGATAATCCGTATGTGAAGTTGCTGGTTGTGTTTGGTCGAGATGATAAAGACCTGTTGCAGGCGGCAAAAGGTATCGCA CAAGGGAATATTCTCTTCCGTGGTTCCAGCGTGGTGGTCAACGATGTAAAACCGCTGCTGGCGCGCAAACCGTATGATGC GCCGAACTGGGTGCGTACCGATCGCCCGGTCACTTTTGGCGAGCTGAAAACCTATGAAGAGCAGCTCCAGTCGAGTGGGC TGGAGCCGGCGCCCATCAACGTTTCTTTGAATCTGCCGCCGGACCTCTATTTGCTGCGTAGCAACGGTATTGATATGGAT CTCAACTACCGTTATACCTCGCCGCCGACCAAAGACAGTTCACGGCTGGATATCAGTCTGAATAACCAGTTCCTGCAAGC CTTTAGCCTTAACAGCACGCAGGAAACTAATCGACTCCTGTTGCGCCTGCCGGTACTTCAGGGACTGCTGGATGGTAAAA CGGATGTGTCTATTCCGGCGCTCAAACTGGGGGCGATGAACCAACTACGTTTTGACTTCCGCTATATGAATCCGATGCCG GGCGGGTCGGTGGACAACTGTATTACCTTCCAGCCGGTACCGAATCATGTGGTGATAGGGGATGACTCCACTATCGATTT TTCGAAATATTACCACTTTATCGCGATGCCGGATTTACGCGCGTTCGCCAATGCGGGTTTCCCGTTCAGCCGGATGGCCG ACCTGTCTGACACGCTGGCGGTGATGCCGAAGACCCCAACCGAAGCGCAAATGGAAACGCTGCTGAATACGGTCGGCGCC ATTGGCGGACAGACCGGTTTCCCGGCAATTAATCTGACAATCACCGATGATAGCGCTCAGATAGCCGACAAAGACGCCGA TCTGCTGATTATTAGCGCTATTCCGGGCAAGCTAAAAGACGATAAGCGTATCGATCTGTTGGTGCAGGCGACACAAAGCT GGGTAAAAACCCCGATGCGGCAGACCGCTTTCCCGTCGATTATGCCGGATGAGGCCGATCGCGCGGCGGATGCGCAGTCC ACCGTCACCGCCAGCGGCCCGATGGCGGCGGTGGTGGGCTTCCAGTCGCCGTTTAACGATCAGCGCAGCGTGATTGCTCT GCTGGCTGACAGCCCGCGCGGTTACCAGCTACTGAACGACGCCGTGAACGACAGCGGTAAACGCGCCGCGATGTTTGGTT CCGTGGCGGTGATCCGCGAGTCCGGCGTTCACAGTCTGCGCGTTGGCGATATCTATTACGTCGGACATCTGCCGTGGTTT GAGCGGCTGTGGTATGCGCTGGCGAATCACCCGGTGCTGCTGGCGGTACTGGCGGCCCTCAGTGTGGTATTACTGGCGTG GGTATTGTGGCGTCTGCTACGTATTCTCAGTCGCCGTCGTCTCGACCCTGACCATGAGTAA
Upstream 100 bases:
>100_bases GCCTGGATTGTATCGTTTATTCCGCGTCGCCCGGAGCGGCAAGCGGCGATACAGCCGTCGGATCGGGTTATGGCTCAGGC TCAACAATGATGATAATGCG
Downstream 100 bases:
>100_bases CGCATGATGACTATGCTGCGCGGATGGATAACGATGCTCGTCATGCTGACGGCAATAAATGCGCAGGCAGCCTGTAGCTG GCCTGCGTGGGAACAGTTCA
Product: cellulose synthase regulator protein
Products: NA
Alternate protein names: Cellulose synthase regulatory subunit [H]
Number of amino acids: Translated: 766; Mature: 766
Protein sequence:
>766_residues MKRKLSWMCAAVIGLSAFPAFMTAAAPATPPLINAEPTEPAPSPATEAPVVAQTAPSREVKLTFAQIAPPPGSMALRGVN PNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLE FVGHYRDVCENPASSTLWLDIGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMSHPDNPYVKLLVVFGRDDKDLLQAAKGIA QGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMD LNYRYTSPPTKDSSRLDISLNNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGA IGGQTGFPAINLTITDDSAQIADKDADLLIISAIPGKLKDDKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQS TVTASGPMAAVVGFQSPFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE
Sequences:
>Translated_766_residues MKRKLSWMCAAVIGLSAFPAFMTAAAPATPPLINAEPTEPAPSPATEAPVVAQTAPSREVKLTFAQIAPPPGSMALRGVN PNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLE FVGHYRDVCENPASSTLWLDIGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMSHPDNPYVKLLVVFGRDDKDLLQAAKGIA QGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMD LNYRYTSPPTKDSSRLDISLNNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGA IGGQTGFPAINLTITDDSAQIADKDADLLIISAIPGKLKDDKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQS TVTASGPMAAVVGFQSPFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE >Mature_766_residues MKRKLSWMCAAVIGLSAFPAFMTAAAPATPPLINAEPTEPAPSPATEAPVVAQTAPSREVKLTFAQIAPPPGSMALRGVN PNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLE FVGHYRDVCENPASSTLWLDIGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMSHPDNPYVKLLVVFGRDDKDLLQAAKGIA QGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMD LNYRYTSPPTKDSSRLDISLNNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLAVMPKTPTEAQMETLLNTVGA IGGQTGFPAINLTITDDSAQIADKDADLLIISAIPGKLKDDKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQS TVTASGPMAAVVGFQSPFNDQRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE
Specific function: Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsB/BcsB family [H]
Homologues:
Organism=Escherichia coli, GI1789952, Length=779, Percent_Identity=82.6700898587933, Blast_Score=1316, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003920 - InterPro: IPR018513 [H]
Pfam domain/function: PF03170 BcsB [H]
EC number: NA
Molecular weight: Translated: 84300; Mature: 84300
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKLSWMCAAVIGLSAFPAFMTAAAPATPPLINAEPTEPAPSPATEAPVVAQTAPSREV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEE KLTFAQIAPPPGSMALRGVNPNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVY EEEEEEECCCCCCEEEEECCCCCCEEECCCCHHHHCEEEEEEEECCCCCEEECCCCEEEE LNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLEFVGHYRDVCENPASSTLWLD ECCCEEEEECCCHHHHCCHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHCCCCCCEEEEE IGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW ECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMSHPDNPYVK HCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHCCCCCCCHHHHHHCCCCCCEEE LLVVFGRDDKDLLQAAKGIAQGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFG EEEEECCCCHHHHHHHHCCCCCCEEEECCCEEEECHHHHHHCCCCCCCCCCCCCCCCCHH ELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMDLNYRYTSPPTKDSSRLDISL HHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCEEEEEE NNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP CCCEEHHCCCCCCCCHHHEEEEEHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEECCCC GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLA CCCCCCEEEECCCCCEEEECCCCCEEHHHHEEEEECCCHHHHHCCCCCHHHHHCCCCCEE VMPKTPTEAQMETLLNTVGAIGGQTGFPAINLTITDDSAQIADKDADLLIISAIPGKLKD ECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC DKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQSTVTASGPMAAVVGFQSPFND CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCCCEEECCCCEEEEEECCCCCCC QRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF CCEEEEEEECCCCCHHHHHHHHCCCCCEEEHHCCEEEEECCCCCEEEECCEEEECCCCHH ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRKLSWMCAAVIGLSAFPAFMTAAAPATPPLINAEPTEPAPSPATEAPVVAQTAPSREV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEE KLTFAQIAPPPGSMALRGVNPNGGIEFGMRSDEVASKAVLNLEYTPSPSLLPVQSQLKVY EEEEEEECCCCCCEEEEECCCCCCEEECCCCHHHHCEEEEEEEECCCCCEEECCCCEEEE LNDELMGVLPVTKEQLGKKTLAQVPINPLFITDFNRVRLEFVGHYRDVCENPASSTLWLD ECCCEEEEECCCHHHHCCHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHCCCCCCEEEEE IGRNSALDLTYNMLAVNNDLSHFPVPFFDPRDNRPVTLPIVFADMPDLAQQQAASIVASW ECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH FGSRAGWRGQRFPVLYNHLPDRNAIVFATNDRRPDFLRDHPAVNAPVIEMMSHPDNPYVK HCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHCCCCCCCHHHHHHCCCCCCEEE LLVVFGRDDKDLLQAAKGIAQGNILFRGSSVVVNDVKPLLARKPYDAPNWVRTDRPVTFG EEEEECCCCHHHHHHHHCCCCCCEEEECCCEEEECHHHHHHCCCCCCCCCCCCCCCCCHH ELKTYEEQLQSSGLEPAPINVSLNLPPDLYLLRSNGIDMDLNYRYTSPPTKDSSRLDISL HHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEEECCCCCCCCCEEEEEE NNQFLQAFSLNSTQETNRLLLRLPVLQGLLDGKTDVSIPALKLGAMNQLRFDFRYMNPMP CCCEEHHCCCCCCCCHHHEEEEEHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEECCCC GGSVDNCITFQPVPNHVVIGDDSTIDFSKYYHFIAMPDLRAFANAGFPFSRMADLSDTLA CCCCCCEEEECCCCCEEEECCCCCEEHHHHEEEEECCCHHHHHCCCCCHHHHHCCCCCEE VMPKTPTEAQMETLLNTVGAIGGQTGFPAINLTITDDSAQIADKDADLLIISAIPGKLKD ECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC DKRIDLLVQATQSWVKTPMRQTAFPSIMPDEADRAADAQSTVTASGPMAAVVGFQSPFND CCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHCCCCCEEECCCCEEEEEECCCCCCC QRSVIALLADSPRGYQLLNDAVNDSGKRAAMFGSVAVIRESGVHSLRVGDIYYVGHLPWF CCEEEEEEECCCCCHHHHHHHHCCCCCEEEHHCCEEEEECCCCCEEEECCEEEECCCCHH ERLWYALANHPVLLAVLAALSVVLLAWVLWRLLRILSRRRLDPDHE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]