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The map label for this gene is yhjK [H]

Identifier: 16766901

GI number: 16766901

Start: 3791714

End: 3793687

Strand: Reverse

Name: yhjK [H]

Synonym: STM3615

Alternate gene names: 16766901

Gene position: 3793687-3791714 (Counterclockwise)

Preceding gene: 16766902

Following gene: 16766900

Centisome position: 78.1

GC content: 54.46

Gene sequence:

>1974_bases
ATGGCAATGGTTGCGGCCGTTGTCATGATGTTTGTTTTTGTCTTTTGCACCGTTTTGTTGTTCCATCTGGTACAGCAGAA
CCGCTACAACACGGCTACGCAACTGGAAAGCATCGCGCGATCTGTTCGGGAACCTCTTTCTTCCGCGATTTTAAAAGCGG
ATCTCCCCGGCGCGGAAACCATTCTGGAAAGTATTAAACCTGCGGGCGTGGTGAGTCGCGCCGATGTGGTATTGCCGAAT
CAGTTCCAGGCGTTGCGTAAGCGCTTCATTCCTGAACGCCCCGTCCCGGTTATGGTGACGCGTCTCTTCGAACTGCCGGT
ACAAATTTCTTTGCCGGTTTATTCGTTGGAGCGTCCTGCCAATCCGCAACCGCTGGCCTACCTTGTATTGCAGGCGGATT
CGTACCGTATGTACAAGTTCGTCATGAGCGCGCTCTCTACGTTAGTGACCATTTACTTACTTTTATCGCTGATCCTGACG
GTGGCCATCGCCTGGTGCGTAAACCGCCTGATTGTGCATCCGCTGCGCAAAATCGCCCGCGAGCTGAACGACATTCCGCA
GCAGGAGCTGATCGGACATCAGCTGGCGTTGCCGCGTCTGCATCAGGATGATGAAATTGGGATGCTGGTGCGCAGCTATA
ACCTCAACCAGCAGCTTATGCAGCGTCAACGCGAGGAGCAAACGGACAACGCGATGCGTTTTCCGGTTTCCGAGCTGCCC
AATAAAGCCTTTTTAATGGCATTGCTGGAACAGGTTATCACCCGCCAACAGACCACCGCGCTTATCATCGTGACGTGCGA
AACGTTGCGTGACACGGCAGGCGTGCTGCAAGAAACGCAGCGGGAGATTCTATTACTGACGCTGGTTGAGAAGCTGAAGT
CGGTGCTGGCGCCGCGCATGGTGCTTACGCAGGTCAGCGGGTATGACTTTGCCATTATCGCCCACGGCGTTAAAGAGCCG
TGGCACGCCATCACATTAGGTCAGCAAATACTCACTATCATTAATGAACGACTGCCCATCCAGGGTATTCAACTGCGCCC
AAGCTGCAGTATTGGCATTGCGATGTATTATGGCGATCTGACCGCCGAAGCGCTCTATGGTCGCGCCGTCTCCGCCGCGT
TTACCGCGCGCCGAAAAGGTAAAAATCAGATCCAGTTCTTTGACCCGGCGCAGATGGAGGCCGCTCAACAGCGCCTTACC
GAAGAGAGCGATATCCTTACCGCGCTGGATAACCATCAGTTTGCCATTTGGCTGCAGCCGCAGGTCGAAATGCGCAGCGG
CAACGTATTAAGCGCCGAAGCCTTGTTACGTATGCAGCAGCCGGACGGTAGCTGGGAATTACCGGAGGGGCTGATTGAGC
GCATTGAATCCTGCGGCCTGATGGTCACGGTGGGCTATTGGGTGCTGGAAGAGTCCTGTCGCCAGCTTGCCGCCTGGCAG
GAGCGCGGCGTGACATTGCCGCTCTCCGTCAATCTTTCCGCGTTACAGCTCATGCACCCTGGCATGGTGTCGGATCTGCT
GGAATTGTTAAACCGCTATCGTATTCAACCGGGTACGCTGATTCTTGAGGTCACTGAAAGCCGCCGTATCGACGATCCAC
ACGCTGCCGTCGCTATCTTACGTCCGTTACGTAATGCTGGCGTGCGTATCGCACTGGATGATTTTGGCATGGGTTACGCG
GGGCTGCGCCAGTTACAGCATATGAAGTCGCTACCGGTCGATATCCTTAAAATTGATAAAATGTTTGTCGATGGGTTACC
GGATGATCACAGTATGGTGACGGCGATTATCCTGATGGCCCGCAGTCTTAATTTACAATTGATTGCCGAGGGCGTGGAGA
ACGAGGCGCAACGCGCGTGGCTGGAACAGGCGGGAGTCAACGTCGCGCAAGGCTTCCTGTTTGCTCGGCCCGTTCCCGCG
GATATCTTTGAAGAACGGTATCTGTCGCACGAAAATCCTGATTACAAAAGTTAA

Upstream 100 bases:

>100_bases
CCTCTCTTAATGCCGCTGCAATCGGGTATACTCAGGCGGCAGTCCGGGATATCCAGGGAGAGTCAATTTGCGCGTCAGCC
GCTCGTTAACAATTAAACAG

Downstream 100 bases:

>100_bases
AAAAGGTCGCGCTTGTGCGAGCCAGCTCAAACTTTTTAACATTTTTGTTTCAATTATGATCCTGGCGCATTTCTGTCATG
TTGTGTGGGTGTTATTTTAA

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MAMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAGVVSRADVVLPN
QFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILT
VAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELP
NKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEP
WHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLT
EESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGYWVLEESCRQLAAWQ
ERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYA
GLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPA
DIFEERYLSHENPDYKS

Sequences:

>Translated_657_residues
MAMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAGVVSRADVVLPN
QFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILT
VAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELP
NKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEP
WHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLT
EESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGYWVLEESCRQLAAWQ
ERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYA
GLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPA
DIFEERYLSHENPDYKS
>Mature_656_residues
AMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAGVVSRADVVLPNQ
FQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTV
AIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELPN
KAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPW
HAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTE
ESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGYWVLEESCRQLAAWQE
RGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYAG
LRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPAD
IFEERYLSHENPDYKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=638, Percent_Identity=84.1692789968652, Blast_Score=1132, Evalue=0.0,
Organism=Escherichia coli, GI1787541, Length=428, Percent_Identity=33.1775700934579, Blast_Score=202, Evalue=8e-53,
Organism=Escherichia coli, GI87081921, Length=429, Percent_Identity=29.3706293706294, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI87081743, Length=236, Percent_Identity=36.0169491525424, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI1790496, Length=251, Percent_Identity=34.6613545816733, Blast_Score=142, Evalue=1e-34,
Organism=Escherichia coli, GI87081845, Length=246, Percent_Identity=31.3008130081301, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1786507, Length=243, Percent_Identity=33.7448559670782, Blast_Score=122, Evalue=1e-28,
Organism=Escherichia coli, GI87081980, Length=264, Percent_Identity=31.0606060606061, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI1788502, Length=250, Percent_Identity=30, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1788849, Length=235, Percent_Identity=31.4893617021277, Blast_Score=110, Evalue=4e-25,
Organism=Escherichia coli, GI87082096, Length=240, Percent_Identity=32.0833333333333, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787055, Length=260, Percent_Identity=26.9230769230769, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1787410, Length=153, Percent_Identity=32.6797385620915, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]

EC number: NA

Molecular weight: Translated: 73960; Mature: 73828

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50885 HAMP ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAET
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPA
HHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCEECCCCC
NPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNRLIVHPLRKIAR
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELP
HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCHHHCC
NKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRM
CHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDL
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCH
TAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTALDNHQFAIWLQP
HHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECC
QVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGYWVLEESCRQLAAWQ
CEEECCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH
ERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAIL
HCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH
RPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMA
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLSHENPDYKS
HCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AMVAAVVMMFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAET
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPA
HHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCEECCCCC
NPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNRLIVHPLRKIAR
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELP
HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCHHHCC
NKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRM
CHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDL
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCH
TAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTALDNHQFAIWLQP
HHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECC
QVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGYWVLEESCRQLAAWQ
CEEECCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH
ERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAIL
HCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH
RPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMA
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RSLNLQLIAEGVENEAQRAWLEQAGVNVAQGFLFARPVPADIFEERYLSHENPDYKS
HCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 10493123 [H]