| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yhhM [H]
Identifier: 16766860
GI number: 16766860
Start: 3741224
End: 3741595
Strand: Reverse
Name: yhhM [H]
Synonym: STM3574
Alternate gene names: 16766860
Gene position: 3741595-3741224 (Counterclockwise)
Preceding gene: 16766864
Following gene: 16766857
Centisome position: 77.03
GC content: 52.96
Gene sequence:
>372_bases ATGAGTAAGCCACCGCTTTTCTTCATTATAATCATTGCATTAATCGTAGTTGCCGCGTCGTTCCGCTTCGTTCAGCAACG GCGGGAAAAAGCCGCTAATGAGGCGGCGCCGTTACAGCAAAAGCAGGTCGTGGTCAGCAATAAACGGGAGAAGCCGGTTA ATGACCGACGCTCTCGCCAGCAGGAAGTGATCCCGGCGGGAACCAGTATGCGCTATGAGGTCAGTTTTAAGCCGCTCAAT GGCGGTCTGGAAAAAACGTTCCGTTTACAAGCGCAGCAGTACCACGCTTTGACGGTGGGCGATCAAGGTACGCTGAGCTA TAAGGGAACGCGGTTCGTCGGGTTTGTTAGCCGTACCCCGGATAACGAATAA
Upstream 100 bases:
>100_bases TTGCGGCTCTATTATTCAGTGTAGAGGCCGTGACGGTCAGATGACAACACTATAACGGGCAGGGTATGCTTATTTCCGCA TTTTCTGACAGGTTAACAGT
Downstream 100 bases:
>100_bases ACCGTCATCCGGCAGCAAACGTTATTTTTTGTTCTTAAACTTCTTCTGCCAGACCAGCAGCTCAAACACGCCGAACAGGA AAATGCGGATTTTCTCTCCC
Product: inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKQVVVSNKREKPVNDRRSRQQEVIPAGTSMRYEVSFKPLN GGLEKTFRLQAQQYHALTVGDQGTLSYKGTRFVGFVSRTPDNE
Sequences:
>Translated_123_residues MSKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKQVVVSNKREKPVNDRRSRQQEVIPAGTSMRYEVSFKPLN GGLEKTFRLQAQQYHALTVGDQGTLSYKGTRFVGFVSRTPDNE >Mature_122_residues SKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKQVVVSNKREKPVNDRRSRQQEVIPAGTSMRYEVSFKPLNG GLEKTFRLQAQQYHALTVGDQGTLSYKGTRFVGFVSRTPDNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789877, Length=116, Percent_Identity=84.4827586206897, Blast_Score=205, Evalue=6e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019635 [H]
Pfam domain/function: PF10694 DUF2500 [H]
EC number: NA
Molecular weight: Translated: 13924; Mature: 13793
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKQVVVSNKREKPVNDRRSRQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHH QEVIPAGTSMRYEVSFKPLNGGLEKTFRLQAQQYHALTVGDQGTLSYKGTRFVGFVSRTP HHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHEEEEEECCCCCEEECCCEEEEEEECCC DNE CCC >Mature Secondary Structure SKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKQVVVSNKREKPVNDRRSRQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHHH QEVIPAGTSMRYEVSFKPLNGGLEKTFRLQAQQYHALTVGDQGTLSYKGTRFVGFVSRTP HHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHEEEEEECCCCCEEECCCEEEEEEECCC DNE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]