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The map label for this gene is ugpA [H]

Identifier: 16766842

GI number: 16766842

Start: 3725410

End: 3726297

Strand: Reverse

Name: ugpA [H]

Synonym: STM3556

Alternate gene names: 16766842

Gene position: 3726297-3725410 (Counterclockwise)

Preceding gene: 16766843

Following gene: 16766841

Centisome position: 76.71

GC content: 55.74

Gene sequence:

>888_bases
ATGTCATCATCCCGTCCGGTGTTCCGCTCGCGCTGGCTGCCGTATTTACTGGTTGCCCCGCAGTTGGTTATCACCGTTAT
TTTCTTTATCTGGCCTGCGGGCGAAGCGCTGTGGTATTCGCTGCAAAGCGTCGATCCGTTTGGTTTTTCCAGCCAATTTG
TCGGGCTGGAGAATTTCGTCGCGCTTTTTCACGACAGTTATTATCTCGACGCCTTCTGGACGACGATTAAATTCAGCGCG
CTGGTCACGTTTAGCGGCCTGCTGGTCTCGCTGTTTTTCGCCGCCCTGGTGGATTACGTGGTGCGCGGCAGCCGTTTTTA
TCAGACGCTGATGCTGCTGCCTTATGCCGTCGCGCCCGCCGTCGCCGCCGTATTGTGGATTTTCCTGTTTAACCCGGGGC
GGGGATTAATCACCCATTTCCTTGGCGAATTCGGCTATGACTGGAACCACGCGCAAAACAGCGGTCAGGCGATGTTCCTG
GTGGTATTTGCGTCAGTCTGGAAGCAGATTAGTTACAACTTTTTATTCTTCTTTGCCGCGCTGCAATCCATTCCCCGCTC
GCTGGTGGAAGCGGCGGCCATTGACGGCGCCGGGCCGATTCGTCGTTTCTTCCGGCTTTCTTTGCCGCTTATTGCGCCGG
TCAGTTTCTTCCTGCTGGTGGTCAACCTGGTGTACGCCTTTTTCGACACCTTCCCGGTGATCGACGCCGCGACCGCCGGC
GGGCCGGTACAAGCCACTACGACGCTGATTTATAAGATTTATCGCGAAGGGTTTACCGGCCTGGATCTCTCGGCGTCCGC
CGCGCAGTCGGTAGTGTTGATGTTCCTCGTCATCATTCTGACGGTGGTGCAGTTCCGCTATGTGGAAAGTAAGGTGCGTT
ACCAATGA

Upstream 100 bases:

>100_bases
GTTGCTGCGTCGTTTTGAGAAAGCGAGCAAATCTTAAGTGTATAAGTGCCGGATAAGGTGCATGCACCGCCATCCGGCAC
CTTCCAGGAAAAGAACCTTC

Downstream 100 bases:

>100_bases
TAGAGAATCGTCGCGGGCTGACAATATTCAGCCATACCATGCTGATTCTGGGGATCGCGGTCATTTTGTTTCCGCTGTAT
GTCGCGTTTGTCGCGGCGAC

Product: glycerol-3-phosphate transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLENFVALFHDSYYLDAFWTTIKFSA
LVTFSGLLVSLFFAALVDYVVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLGEFGYDWNHAQNSGQAMFL
VVFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAG
GPVQATTTLIYKIYREGFTGLDLSASAAQSVVLMFLVIILTVVQFRYVESKVRYQ

Sequences:

>Translated_295_residues
MSSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLENFVALFHDSYYLDAFWTTIKFSA
LVTFSGLLVSLFFAALVDYVVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLGEFGYDWNHAQNSGQAMFL
VVFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAG
GPVQATTTLIYKIYREGFTGLDLSASAAQSVVLMFLVIILTVVQFRYVESKVRYQ
>Mature_294_residues
SSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLENFVALFHDSYYLDAFWTTIKFSAL
VTFSGLLVSLFFAALVDYVVRGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLGEFGYDWNHAQNSGQAMFLV
VFASVWKQISYNFLFFFAALQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAGG
PVQATTTLIYKIYREGFTGLDLSASAAQSVVLMFLVIILTVVQFRYVESKVRYQ

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=295, Percent_Identity=93.5593220338983, Blast_Score=542, Evalue=1e-155,
Organism=Escherichia coli, GI1790465, Length=260, Percent_Identity=30.7692307692308, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1787570, Length=249, Percent_Identity=31.3253012048193, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33172; Mature: 33041

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSSRPVFRSRWLPYLLVAPQLVITVIFFIWPAGEALWYSLQSVDPFGFSSQFVGLENFV
CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHH
ALFHDSYYLDAFWTTIKFSALVTFSGLLVSLFFAALVDYVVRGSRFYQTLMLLPYAVAPA
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VAAVLWIFLFNPGRGLITHFLGEFGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFFAA
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LQSIPRSLVEAAAIDGAGPIRRFFRLSLPLIAPVSFFLLVVNLVYAFFDTFPVIDAATAG
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GPVQATTTLIYKIYREGFTGLDLSASAAQSVVLMFLVIILTVVQFRYVESKVRYQ
CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]