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The map label for this gene is yrdA [H]

Identifier: 16766688

GI number: 16766688

Start: 3572482

End: 3573036

Strand: Direct

Name: yrdA [H]

Synonym: STM3399

Alternate gene names: 16766688

Gene position: 3572482-3573036 (Clockwise)

Preceding gene: 16766687

Following gene: 16766695

Centisome position: 73.55

GC content: 50.99

Gene sequence:

>555_bases
ATGTCTGACACATTACGTCCTTATAAGAATCTTTTTCCTGGTATCGGTCAGCGCGTGATGATCGATACCAGCAGCGTGGT
TATTGGCGATGTCCGTCTGGCGGATGATGTCGGGATCTGGCCGCTTGTGGTGATTCGCGGCGATGTGAATTACGTTGCGA
TAGGGGCTCGTACGAACATTCAGGATGGCAGCGTTCTTCACGTAACCCACAAGTCTTCATCCAATCCACACGGCAACCCA
TTAATCATTGGCGAAGATGTTACCGTTGGCCATAAAGTTATGCTGCACGGCTGTACCATCGGTAACCGCGTACTGGTCGG
TATGGGCTCCATTGTGCTGGATGGCGCGATAATAGAAGATGACGTAATGATTGGCGCGGGAAGCCTGGTGCCGCAGCACA
AACGGCTGGAAAGCGGCTATTTATATCTTGGCAGTCCGGTAAAACAGATCCGCCCCTTGAGCGATGCTGAGAGATCGGGC
CTGCAGTACTCCGCCAATAACTATGTAAAGTGGAAAGACGACTATCTTTCTCAGGATAACCATATCCAACCGTGA

Upstream 100 bases:

>100_bases
TTCCTGCGCAAAGTGGCGATTTTTTGATGCTATCTCCCCTTGCACAACGCCGTTAAAGCAACCAAAGTCTTCATGACTAT
TCATTTATGATGAGGTAGAC

Downstream 100 bases:

>100_bases
TCATCTTCCTGCTGGGCCAGGATTAATGCTTCCGCCTCTTCTTCCAGGTCCCAGCGATACTCACGAAAAATGGCCAGCCA
TTGCTCCGCTGTTTCTCCAC

Product: ferripyochelin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSDTLRPYKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNP
LIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSG
LQYSANNYVKWKDDYLSQDNHIQP

Sequences:

>Translated_184_residues
MSDTLRPYKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNP
LIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSG
LQYSANNYVKWKDDYLSQDNHIQP
>Mature_183_residues
SDTLRPYKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPL
IIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSGL
QYSANNYVKWKDDYLSQDNHIQP

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=184, Percent_Identity=87.5, Blast_Score=328, Evalue=1e-91,
Organism=Escherichia coli, GI87081681, Length=166, Percent_Identity=34.3373493975904, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787667, Length=158, Percent_Identity=33.5443037974684, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19997; Mature: 19866

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTLRPYKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNI
CCCCCCHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCC
QDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIED
CCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCEEECCEEEEC
DVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSGLQYSANNYVKWKDDYLSQDN
CEEEECCCCCCCCHHHCCCEEEECCCHHHHCCCCCHHHCCCEECCCCEEEECHHHCCCCC
HIQP
CCCC
>Mature Secondary Structure 
SDTLRPYKNLFPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNI
CCCCCHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCC
QDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIED
CCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCEEECCEEEEC
DVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSGLQYSANNYVKWKDDYLSQDN
CEEEECCCCCCCCHHHCCCEEEECCCHHHHCCCCCHHHCCCEECCCCEEEECHHHCCCCC
HIQP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]