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The map label for this gene is yhdT [H]

Identifier: 16766676

GI number: 16766676

Start: 3552034

End: 3552276

Strand: Direct

Name: yhdT [H]

Synonym: STM3381

Alternate gene names: 16766676

Gene position: 3552034-3552276 (Clockwise)

Preceding gene: 16766675

Following gene: 16766677

Centisome position: 73.13

GC content: 54.73

Gene sequence:

>243_bases
ATGGACGCTCGTTTTGTTCAGGCCCATAAAGAGGCGCGCTGGGCGCTGTGGCTGACCCTTTGCTATCTGGCGGCATGGTT
AGTGGCTGCTTACTTACCTGGAGACTCGCCGGGAATCACCGGTCTGCCGCACTGGTTCGAGATGGCCTGCTTATTGACGC
CGCTGGTCTTTATTTTGCTGTGCTGGGCGATGGTGAAATTCATTTATCGCGATATTTCGCTGGAGGATGACGATGCAGCT
TGA

Upstream 100 bases:

>100_bases
TAATCTCAAAAGGCCGGTGAATCCGGCCTTTTTTATTTCTGGGGATAGCGATGCCCCATCATGTACAATTCCCGCTTTCT
TCACCCATAAGGGACAAAAA

Downstream 100 bases:

>100_bases
GGTCATTCTACCGCTGGTAGCCTATCTGGTCGTGGTCTTCGGGGTCTCGATTTACGCTATGCGCAAGCGTACCGCCGGCA
CCTTTTTAAACGAATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MDARFVQAHKEARWALWLTLCYLAAWLVAAYLPGDSPGITGLPHWFEMACLLTPLVFILLCWAMVKFIYRDISLEDDDAA

Sequences:

>Translated_80_residues
MDARFVQAHKEARWALWLTLCYLAAWLVAAYLPGDSPGITGLPHWFEMACLLTPLVFILLCWAMVKFIYRDISLEDDDAA
>Mature_80_residues
MDARFVQAHKEARWALWLTLCYLAAWLVAAYLPGDSPGITGLPHWFEMACLLTPLVFILLCWAMVKFIYRDISLEDDDAA

Specific function: Unknown

COG id: COG3924

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0974B [H]

Homologues:

Organism=Escherichia coli, GI1789655, Length=80, Percent_Identity=82.5, Blast_Score=134, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010398
- ProDom:   PD745092 [H]

Pfam domain/function: PF06196 DUF997 [H]

EC number: NA

Molecular weight: Translated: 9146; Mature: 9146

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARFVQAHKEARWALWLTLCYLAAWLVAAYLPGDSPGITGLPHWFEMACLLTPLVFILL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CWAMVKFIYRDISLEDDDAA
HHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDARFVQAHKEARWALWLTLCYLAAWLVAAYLPGDSPGITGLPHWFEMACLLTPLVFILL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
CWAMVKFIYRDISLEDDDAA
HHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2193919; 9278503 [H]