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The map label for this gene is yedZ

Identifier: 16766673

GI number: 16766673

Start: 3549103

End: 3549702

Strand: Direct

Name: yedZ

Synonym: STM3378

Alternate gene names: 16766673

Gene position: 3549103-3549702 (Clockwise)

Preceding gene: 16766672

Following gene: 16766674

Centisome position: 73.07

GC content: 51.0

Gene sequence:

>600_bases
GTGCGTCTGACAGCAAAACAGATAACCTGGCTAAAAGTTTGTCTGCATCTTGCCGGTTTTTTGCCGCTTCTGTGGCTCTT
TTGGGCGATAAATCACGGTGGACTCAGCGCAGACCCGGTAAAGGATATCCAACACTTTACCGGCAGAACCGCGCTCAAAT
TTTTGCTCGCCACCTTGCTGGTTTCACCGCTGGCGCGCTACGCTAAACAGCCATTATTGATACGCACACGCCGCCTGTTA
GGATTATGGTGTTTCGTTTGGGCTACGCTGCATTTAACCAGCTATGCCTTACTGGAACTGGGGATACATAACCTGGCGCT
GTTAGGAAGCGAGTTGATTTCACGCCCTTATTTGACGCTTGGGATCATTAGCTGGCTGGTGTTATTGGCGCTGACGTTGA
CCTCAACGCAATTTGCGCAGCGTAAATTGGGCAAACGCTGGCAAACACTGCATAACGTCGTCTATCTTGTCGCGATCCTG
GCTCCCATACATTACCTGTGGTCGGTAAAGATTTTATCACCGCAACCGGTCATCTACGCGGCATTAGCGTTAGCCCTTTT
AGCGTTGCGTTACCGGAAGTTTCGCCAGTGGTGGCGCTAG

Upstream 100 bases:

>100_bases
TATCCTTGATGTGCAAAGGCAGCCGACGCTGCTGTTTAACGGCTACGCCAATGAAGTCGCTTCGCTGTATCGCGGTCTCA
ATTTGCGGGAGAATTTTTAA

Downstream 100 bases:

>100_bases
TTTGGTGAACTGTGCGGTCGATTGCAAAACGCAAAACAGGTAATGTCCTTTTTATGTTTCGGGTTGATTATCTTCCCTGA
TAAGACCAGTATTTAGCTGC

Product: sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRLTAKQITWLKVCLHLAGFLPLLWLFWAINHGGLSADPVKDIQHFTGRTALKFLLATLLVSPLARYAKQPLLIRTRRLL
GLWCFVWATLHLTSYALLELGIHNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAIL
APIHYLWSVKILSPQPVIYAALALALLALRYRKFRQWWR

Sequences:

>Translated_199_residues
MRLTAKQITWLKVCLHLAGFLPLLWLFWAINHGGLSADPVKDIQHFTGRTALKFLLATLLVSPLARYAKQPLLIRTRRLL
GLWCFVWATLHLTSYALLELGIHNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAIL
APIHYLWSVKILSPQPVIYAALALALLALRYRKFRQWWR
>Mature_199_residues
MRLTAKQITWLKVCLHLAGFLPLLWLFWAINHGGLSADPVKDIQHFTGRTALKFLLATLLVSPLARYAKQPLLIRTRRLL
GLWCFVWATLHLTSYALLELGIHNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAIL
APIHYLWSVKILSPQPVIYAALALALLALRYRKFRQWWR

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family

Homologues:

Organism=Escherichia coli, GI1788283, Length=196, Percent_Identity=85.2040816326531, Blast_Score=323, Evalue=4e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEDZ_SALA4 (B5F7N8)

Other databases:

- EMBL:   CP001138
- RefSeq:   YP_002148302.1
- GeneID:   6795957
- GenomeReviews:   CP001138_GR
- KEGG:   sea:SeAg_B3569
- HOGENOM:   HBG751530
- OMA:   ILGLDWG
- ProtClustDB:   PRK05419
- GO:   GO:0006810
- HAMAP:   MF_01207
- InterPro:   IPR013130
- InterPro:   IPR022837

Pfam domain/function: PF01794 Ferric_reduct

EC number: NA

Molecular weight: Translated: 22868; Mature: 22868

Theoretical pI: Translated: 11.43; Mature: 11.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11a38e80)-; HASH(0x11f9e428)-; HASH(0x1188e054)-; HASH(0x10a123a0)-; HASH(0x11b35604)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTAKQITWLKVCLHLAGFLPLLWLFWAINHGGLSADPVKDIQHFTGRTALKFLLATLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VSPLARYAKQPLLIRTRRLLGLWCFVWATLHLTSYALLELGIHNLALLGSELISRPYLTL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
GIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAILAPIHYLWSVKILSPQPVIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALALALLALRYRKFRQWWR
HHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MRLTAKQITWLKVCLHLAGFLPLLWLFWAINHGGLSADPVKDIQHFTGRTALKFLLATLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VSPLARYAKQPLLIRTRRLLGLWCFVWATLHLTSYALLELGIHNLALLGSELISRPYLTL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
GIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAILAPIHYLWSVKILSPQPVIYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ALALALLALRYRKFRQWWR
HHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA