| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is yhcR
Identifier: 16766661
GI number: 16766661
Start: 3532913
End: 3533116
Strand: Reverse
Name: yhcR
Synonym: STM3366
Alternate gene names: 16766661
Gene position: 3533116-3532913 (Counterclockwise)
Preceding gene: 16766663
Following gene: 16766660
Centisome position: 72.74
GC content: 45.59
Gene sequence:
>204_bases ATGAGTCTGTTTCCCGTTATCGTGGTGTTTGGTCTTTCCTTCCCACCGATATTTTTCGAATTGCTTTTGTCACTGGCTAT TTTTTGGCTGGTGCGTCGGATGCTTGTGCCGACGGGCATCTATGATTTTGTCTGGCATCCGGCTCTGTTCAATACCGCGC TGTATTGTTGTCTGTTTTATTTAATATCGCGCCTGTTCGTTTGA
Upstream 100 bases:
>100_bases ATAAGAGCTATGTCGCTCTCGCCTGGCGTCTCTTGCCCTTCTCTGCGGCGATGTAGCTTAACAATCTATCGCCTGCTCTC TCTCAGAAATCAAGGTCAAC
Downstream 100 bases:
>100_bases GGTTGAAGTGAAAACACTAACAAGAAAACTCTCCCGTACGGCCATTACCCTCGTACTGGTTATTCTGGCCTTTATCGCCA TTTTCCGCGCCTGGGTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRMLVPTGIYDFVWHPALFNTALYCCLFYLISRLFV
Sequences:
>Translated_67_residues MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRMLVPTGIYDFVWHPALFNTALYCCLFYLISRLFV >Mature_66_residues SLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRMLVPTGIYDFVWHPALFNTALYCCLFYLISRLFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AaeX family
Homologues:
Organism=Escherichia coli, GI87082234, Length=67, Percent_Identity=98.5074626865672, Blast_Score=129, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AAEX_CITK8 (A8AQD6)
Other databases:
- EMBL: CP000822 - RefSeq: YP_001456135.1 - STRING: A8AQD6 - GeneID: 5584411 - GenomeReviews: CP000822_GR - KEGG: cko:CKO_04650 - eggNOG: NOG06923 - HOGENOM: HBG468898 - OMA: CCLFYLL - ProtClustDB: PRK11594 - HAMAP: MF_01546 - InterPro: IPR012451
Pfam domain/function: PF07869 DUF1656
EC number: NA
Molecular weight: Translated: 7879; Mature: 7748
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x11c28f3c)-; HASH(0x11f17624)-;
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRMLVPTGIYDFVWHPALFNTALYCCLFY CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LISRLFV HHHHHCH >Mature Secondary Structure SLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRMLVPTGIYDFVWHPALFNTALYCCLFY CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LISRLFV HHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA