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The map label for this gene is yhcB [H]

Identifier: 16766642

GI number: 16766642

Start: 3514856

End: 3515260

Strand: Direct

Name: yhcB [H]

Synonym: STM3347

Alternate gene names: 16766642

Gene position: 3514856-3515260 (Clockwise)

Preceding gene: 16766629

Following gene: 16766643

Centisome position: 72.36

GC content: 52.84

Gene sequence:

>405_bases
ATGTTCATGACCTGGGAATATGCGCTAATTGGATTAGTCGTCGGTATCATCATTGGTGCCGTGGCCATGCGTTTTGGTAA
TCGTAAGTTACGTCAACAGCAGGCATTGCAGTACGAACTGGAAAAAAACAAAGCTGAGCTGGAAGAGTACCGTGAAGAGC
TGGTTAGCCACTTTGCCCGCAGCGCGGAACTGCTGGATACCATGGCGCATGATTACCGCCAGCTGTATCAGCATATGGCG
AAAAGCTCCAGCAGCCTGCTGCCGGAAATGTCTGCGGAGTCGAATCCGTTCCGTAACCGTCTGGCGGAGTCTGAGGCGAG
CAACGATCAGGCGCCAGTACAAATGCCACGTGATTATTCTGAAGGCGCGTCTGGCCTGTTACGTAGCGGCGCAAAGCGCG
ATTAA

Upstream 100 bases:

>100_bases
CGGGATTCCACTTCTACGGAATTAGCGGTTATAGTGGCATAATCAGGCGCGGGCATGGAGCCTGGAGCCAACACCCTACG
GAAACATAAGACAACGGGAG

Downstream 100 bases:

>100_bases
TCGCACGCCGTTAAGAAATTTATCGGGCGCATCGCTTGCGCCCTCTCTCTATCTTTCCTGTCCCAGCTATTATCATTGTT
ACCAGGCTGAAAATTCAATA

Product: cytochrome d ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFARSAELLDTMAHDYRQLYQHMA
KSSSSLLPEMSAESNPFRNRLAESEASNDQAPVQMPRDYSEGASGLLRSGAKRD

Sequences:

>Translated_134_residues
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFARSAELLDTMAHDYRQLYQHMA
KSSSSLLPEMSAESNPFRNRLAESEASNDQAPVQMPRDYSEGASGLLRSGAKRD
>Mature_134_residues
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFARSAELLDTMAHDYRQLYQHMA
KSSSSLLPEMSAESNPFRNRLAESEASNDQAPVQMPRDYSEGASGLLRSGAKRD

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=132, Percent_Identity=96.969696969697, Blast_Score=245, Evalue=6e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 15273; Mature: 15273

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFAR
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAELLDTMAHDYRQLYQHMAKSSSSLLPEMSAESNPFRNRLAESEASNDQAPVQMPRDYS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHH
EGASGLLRSGAKRD
HHHHHHHHCCCCCC
>Mature Secondary Structure
MFMTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYREELVSHFAR
CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAELLDTMAHDYRQLYQHMAKSSSSLLPEMSAESNPFRNRLAESEASNDQAPVQMPRDYS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHH
EGASGLLRSGAKRD
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]