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The map label for this gene is yhcH [H]

Identifier: 16766630

GI number: 16766630

Start: 3504441

End: 3504908

Strand: Reverse

Name: yhcH [H]

Synonym: STM3335

Alternate gene names: 16766630

Gene position: 3504908-3504441 (Counterclockwise)

Preceding gene: 16766631

Following gene: 16766624

Centisome position: 72.16

GC content: 53.42

Gene sequence:

>468_bases
ATGATGATGGGGGAAGTACAGTCGTTGCCTTCTTGCGGGTTGCATCCGCGATTGTTGGATGCCTTGACTCTCGCGCTGGC
GGCAAGGCCGCAGGAGAAAGCGCCGGGGCGCTATGAATTGCAGGGCGACAATGTCTTTATGAATGTAATGCAGTTAACGA
CGCAAATGCCGGCCGAGAAGAAAGCGGAATTGCATGAACAATACATTGATATTCAGCTACTACTAACCGGCGTCGAGCGT
ATTGCGTTTGGGATGTCCGGTGCCGCTCGCCAGTGCGAGGAGATGCACGTTGAAGAGGATTACCAGCTTTGTAGTCAAAT
TGTCGACGAGCAGACTATTACGCTGCAAGCGGGGATGTTTGCTGTGTTTATGCCGGGAGAACCGCATAAACCGGGATGTG
CAGTGGGTGAGCCGGATGACATCAAGAAAGTGGTAGTGAAAGTACGCGCCAGTCTGCTGGCGGCCTGA

Upstream 100 bases:

>100_bases
TGCAAGAGCCTGCGCCTTATCACGTGGCGCTGAGCGCCGCTCGCTATCGGCATGACGCAGGATTATTAGGCGCTGCGTTG
TTAGCTCAAGGAGACACATT

Downstream 100 bases:

>100_bases
ATCTCTTGCCGGAGCAGTCTTCCGAACGCAGCCCCTTACGGGGCTGCGTGGTGAATGTGCCGGAGAGCGCGGGTATGACG
GGTTAACGCTTAAACGTCAC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MMMGEVQSLPSCGLHPRLLDALTLALAARPQEKAPGRYELQGDNVFMNVMQLTTQMPAEKKAELHEQYIDIQLLLTGVER
IAFGMSGAARQCEEMHVEEDYQLCSQIVDEQTITLQAGMFAVFMPGEPHKPGCAVGEPDDIKKVVVKVRASLLAA

Sequences:

>Translated_155_residues
MMMGEVQSLPSCGLHPRLLDALTLALAARPQEKAPGRYELQGDNVFMNVMQLTTQMPAEKKAELHEQYIDIQLLLTGVER
IAFGMSGAARQCEEMHVEEDYQLCSQIVDEQTITLQAGMFAVFMPGEPHKPGCAVGEPDDIKKVVVKVRASLLAA
>Mature_155_residues
MMMGEVQSLPSCGLHPRLLDALTLALAARPQEKAPGRYELQGDNVFMNVMQLTTQMPAEKKAELHEQYIDIQLLLTGVER
IAFGMSGAARQCEEMHVEEDYQLCSQIVDEQTITLQAGMFAVFMPGEPHKPGCAVGEPDDIKKVVVKVRASLLAA

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0227 [H]

Homologues:

Organism=Escherichia coli, GI1789615, Length=154, Percent_Identity=80.5194805194805, Blast_Score=242, Evalue=1e-65,
Organism=Escherichia coli, GI87082398, Length=148, Percent_Identity=33.1081081081081, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI1790001, Length=154, Percent_Identity=29.2207792207792, Blast_Score=80, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17056; Mature: 17056

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMGEVQSLPSCGLHPRLLDALTLALAARPQEKAPGRYELQGDNVFMNVMQLTTQMPAEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHH
KAELHEQYIDIQLLLTGVERIAFGMSGAARQCEEMHVEEDYQLCSQIVDEQTITLQAGMF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCEE
AVFMPGEPHKPGCAVGEPDDIKKVVVKVRASLLAA
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMMGEVQSLPSCGLHPRLLDALTLALAARPQEKAPGRYELQGDNVFMNVMQLTTQMPAEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCHH
KAELHEQYIDIQLLLTGVERIAFGMSGAARQCEEMHVEEDYQLCSQIVDEQTITLQAGMF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCEE
AVFMPGEPHKPGCAVGEPDDIKKVVVKVRASLLAA
EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]