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The map label for this gene is yraM [H]

Identifier: 16766562

GI number: 16766562

Start: 3433327

End: 3435369

Strand: Direct

Name: yraM [H]

Synonym: STM3264

Alternate gene names: 16766562

Gene position: 3433327-3435369 (Clockwise)

Preceding gene: 16766560

Following gene: 16766563

Centisome position: 70.68

GC content: 58.25

Gene sequence:

>2043_bases
ATGGTACCCTCAACATTTTCTCGTTTGAACGCCGCACGCGCGCTGCCTGTCGTCCTGGCTGCGCTACTTTTCGCCGGGTG
CGGCACCCAGGCGCCAGATCAAAGCGCAGCCTATATGCAGGGTTCAGCGCAAGCTGACTCCGCCTTTTACCTGCATCAGA
TGCAGCAAAGCGCAGATGATAGCAAGACCAACTGGCAATTACTCGCCATTCATGCACTGCTGAAAGAAGGAAAAAGCCAG
CAGGCCGTCGACCTGTTCAACCAACTCCCGCAAAATCTGAACGATACCCAGCGTCGCGAACAGTCTTTATTAGCGGTAGA
AATCAAACTGGCGCAAAAAGATGTCGCAGGCGCGCAGGCCTTGCTGGATAAACTAAAACCCGCCGACTTTGCGCCAAATC
AACAAGCGCGTTACTGGCAGGCGCAGATCGTTGCCAGCCAGGGACGCCCGTCGCTTACCCTGTTGCGGGCGTTAATCGCC
CAGGAACCGCTACTGGCGGCGAAAGATAAACAAAAAAATATCGACGCCACCTGGCAGGCGCTCTCCGCCATGACGCCGGA
TCAGGCCAGGACGTTAGTTATCAACGCTGATGAAAATGTGCTTCAGGGCTGGCTGGATCTGCAACGCGTCTGGTTTGACA
ACCGCAACGATCCAGACATGCTGAAAGCTGGGATCGCCGACTGGCAAAAACGCTACCCGCAAAATCCGGGGGCGAAAATG
CTGCCGACGCAGCTCGTCAATGTACAACGTTTCAAACCGGCTTCCACCAGCAAAATCGCTCTGCTGCTGCCGCTGAACGG
TCAGGCTGCCGTGTTTGGCCGTACCATCCAGCAAGGTTTCGAAGCCGCGAAAAACCTCGGCACCCAGGCGGTGGAGATGC
AGCCTGCCGCCGCTCCTGACGCGCCGGTCGAACCTGGCGTGGAGGAGACGCAACCACAAATGACCAACGGCGTCGCCAGT
CCGTCGCAGGCCTCGGTGAGCGATCTGACTGATGACGCTCCAGCCCAGTCCGCTACGCCAGTCAGCGCGCCACAAACTCC
CCCTGCTACAGCAAGCGCGCCGGCGGATCCCTCCGCTGAATTAAAAATCTACGATACCTCTTCCCAGCCGTTGGATCAGG
TGCTTGCTCAGGTTCAGCAAGACGGCGCCAGTATCGTGGTCGGGCCGCTGTTGAAAAACAATGTGGAAGCGCTGATGAAA
AGCAACACGCCGCTCAACGTGCTGGCGCTCAACCAGCCGGAAACGGTACGTAGCTTCCCTAATATCTGCTATTTCGCGCT
CTCTCCAGAAGATGAAGCCCGTGACGCGGCGCATCATATTTATGACCAGGGCAAGCAGTCGCCGCTGCTGTTGATTCCAC
GCAGCGCGCTTGGCGATCGCGTGGCGAACGCCTTCACCCAGGAGTGGCAAAAACTGGGCGGCGGCATCGTGTTACAGCAA
AAATTCGGCTCCGTAGCCGAGCTGAAAATGGGCGTGAACGGCGGCGCGGGTATCGCGTTGACTGGCAGTCCAGTCGCCGC
CAGCGTGCCTGCGCAGCCTGGCGTCACCATTGGCGGTCTGACCATCCCTGCGCCGCCGACCGACGCGCAAATCACCGGCG
GCGGACGCGTAGACGCGGTCTATATTCTGGCTACGCCGGAAGAGATTGGCTTTATCAAACCGATGATCGCCATGCGTAAC
GGCACCCAGAGCGGCGCGACGCTGTATGCCAGCTCTCGCAGCGCGCAAGGCACCTCCGGCCCCGACTTCCGTCTGGAAAT
GGAGGGTTTACAATACAGTGAAATTCCTATGCTGGCAGGCGGCAATATGCCGTTGATGCAGCAGGCGCTGAGCGCTGTAC
ATAACGACTATTCTCTGGCGCGGATGTACGCCATGGGCGTGGATGCCTGGACGCTGGCGAACCACTTTTCGCAGATGCGT
CAGGTGCAGGGGTTTGAGATCAATGGCAATACCGGCGCATTAACCGCCAGCCCGGATTGTGTGATTAACAGGAAGTTATC
ATGGCTCAAATACCAGCAAGGGGAGATTGTTCCCGCCAGCTAA

Upstream 100 bases:

>100_bases
GGCCCTGAGAATTATCCGCCGATTCGTTTTGTTTCATTGTGTCGTCCGTATTGCCGATTTAATATTGAGCATTGCGTAAA
AAAATATCACTGGATACAGT

Downstream 100 bases:

>100_bases
CGCGTAAACAGGCTGGCGACGCGTGGGAAGCTGCCGCGCGTCGCTGGCTGGAAAGCAAAGGACTGCGGTTTATCGCCGCC
AACGTGCGCGAGCGCGGCGG

Product: transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADDSKTNWQLLAIHALLKEGKSQ
QAVDLFNQLPQNLNDTQRREQSLLAVEIKLAQKDVAGAQALLDKLKPADFAPNQQARYWQAQIVASQGRPSLTLLRALIA
QEPLLAAKDKQKNIDATWQALSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPAAAPDAPVEPGVEETQPQMTNGVAS
PSQASVSDLTDDAPAQSATPVSAPQTPPATASAPADPSAELKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEALMK
SNTPLNVLALNQPETVRSFPNICYFALSPEDEARDAAHHIYDQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIVLQQ
KFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRVDAVYILATPEEIGFIKPMIAMRN
GTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAGGNMPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFSQMR
QVQGFEINGNTGALTASPDCVINRKLSWLKYQQGEIVPAS

Sequences:

>Translated_680_residues
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADDSKTNWQLLAIHALLKEGKSQ
QAVDLFNQLPQNLNDTQRREQSLLAVEIKLAQKDVAGAQALLDKLKPADFAPNQQARYWQAQIVASQGRPSLTLLRALIA
QEPLLAAKDKQKNIDATWQALSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPAAAPDAPVEPGVEETQPQMTNGVAS
PSQASVSDLTDDAPAQSATPVSAPQTPPATASAPADPSAELKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEALMK
SNTPLNVLALNQPETVRSFPNICYFALSPEDEARDAAHHIYDQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIVLQQ
KFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRVDAVYILATPEEIGFIKPMIAMRN
GTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAGGNMPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFSQMR
QVQGFEINGNTGALTASPDCVINRKLSWLKYQQGEIVPAS
>Mature_680_residues
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADDSKTNWQLLAIHALLKEGKSQ
QAVDLFNQLPQNLNDTQRREQSLLAVEIKLAQKDVAGAQALLDKLKPADFAPNQQARYWQAQIVASQGRPSLTLLRALIA
QEPLLAAKDKQKNIDATWQALSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPAAAPDAPVEPGVEETQPQMTNGVAS
PSQASVSDLTDDAPAQSATPVSAPQTPPATASAPADPSAELKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEALMK
SNTPLNVLALNQPETVRSFPNICYFALSPEDEARDAAHHIYDQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIVLQQ
KFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRVDAVYILATPEEIGFIKPMIAMRN
GTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAGGNMPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFSQMR
QVQGFEINGNTGALTASPDCVINRKLSWLKYQQGEIVPAS

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1655 [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=681, Percent_Identity=80.0293685756241, Blast_Score=1091, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 72622; Mature: 72622

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCC
SKTNWQLLAIHALLKEGKSQQAVDLFNQLPQNLNDTQRREQSLLAVEIKLAQKDVAGAQA
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCEEEEEEEEHHHHHHHHHH
LLDKLKPADFAPNQQARYWQAQIVASQGRPSLTLLRALIAQEPLLAAKDKQKNIDATWQA
HHHHCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPAAAPD
CHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
APVEPGVEETQPQMTNGVASPSQASVSDLTDDAPAQSATPVSAPQTPPATASAPADPSAE
CCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEALMKSNTPLNVLALNQPETVRSFP
EEEEECCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCC
NICYFALSPEDEARDAAHHIYDQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIVLQQ
CEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEH
KFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRVDAV
HCCCEEEEEECCCCCCEEEEECCCCEECCCCCCCCEECCEECCCCCCCCEEECCCCEEEE
YILATPEEIGFIKPMIAMRNGTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAG
EEEECCHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEC
GNMPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFSQMRQVQGFEINGNTGALTASPDC
CCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCEEECCCCC
VINRKLSWLKYQQGEIVPAS
EEECCHHHEEECCCCEECCC
>Mature Secondary Structure
MVPSTFSRLNAARALPVVLAALLFAGCGTQAPDQSAAYMQGSAQADSAFYLHQMQQSADD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCC
SKTNWQLLAIHALLKEGKSQQAVDLFNQLPQNLNDTQRREQSLLAVEIKLAQKDVAGAQA
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCEEEEEEEEHHHHHHHHHH
LLDKLKPADFAPNQQARYWQAQIVASQGRPSLTLLRALIAQEPLLAAKDKQKNIDATWQA
HHHHCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
LSAMTPDQARTLVINADENVLQGWLDLQRVWFDNRNDPDMLKAGIADWQKRYPQNPGAKM
HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
LPTQLVNVQRFKPASTSKIALLLPLNGQAAVFGRTIQQGFEAAKNLGTQAVEMQPAAAPD
CHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
APVEPGVEETQPQMTNGVASPSQASVSDLTDDAPAQSATPVSAPQTPPATASAPADPSAE
CCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LKIYDTSSQPLDQVLAQVQQDGASIVVGPLLKNNVEALMKSNTPLNVLALNQPETVRSFP
EEEEECCCCCHHHHHHHHHHCCCCEEECHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCC
NICYFALSPEDEARDAAHHIYDQGKQSPLLLIPRSALGDRVANAFTQEWQKLGGGIVLQQ
CEEEEEECCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEH
KFGSVAELKMGVNGGAGIALTGSPVAASVPAQPGVTIGGLTIPAPPTDAQITGGGRVDAV
HCCCEEEEEECCCCCCEEEEECCCCEECCCCCCCCEECCEECCCCCCCCEEECCCCEEEE
YILATPEEIGFIKPMIAMRNGTQSGATLYASSRSAQGTSGPDFRLEMEGLQYSEIPMLAG
EEEECCHHHCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEC
GNMPLMQQALSAVHNDYSLARMYAMGVDAWTLANHFSQMRQVQGFEINGNTGALTASPDC
CCCHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCEEECCCCC
VINRKLSWLKYQQGEIVPAS
EEECCHHHEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]