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The map label for this gene is ygiF [H]

Identifier: 16766502

GI number: 16766502

Start: 3367001

End: 3368302

Strand: Reverse

Name: ygiF [H]

Synonym: STM3202

Alternate gene names: 16766502

Gene position: 3368302-3367001 (Counterclockwise)

Preceding gene: 308065956

Following gene: 16766501

Centisome position: 69.34

GC content: 55.3

Gene sequence:

>1302_bases
ATGGCTCAGGAAATCGAATTAAAGTTTATCGTCAATCACGACGCCGTAGATGCGCTGCGAAATCATCTTCATACGCTCGG
CGGCGAGCATCATGCGCCCAGCCAGTTGCTGAATATCTACTTCGAAACGCCTGATAACTGGCTACGCCGCCATGATATGG
GGCTGCGTATTCGTGGTGAAAATGGGCGCTATGAAATGACCATGAAAATTGCCGGCCGGGTAACGGGGGGGCTGCACCAG
CGACCCGAATACAATGTCGCGCTAAGCGAACCCGTGCTGGATCTGACGCAACTTCCGGCGGAGGTCTGGCCGGATGGCAA
CCTGCCCGCCGGCCTGGCATCAAGCGTACAGCCGCTGTTCAGTACCGATTTTTACCGGGAAAAATGGTGTCTGGACGTTG
ACGGCAGCAGGATTGAAATTGCGCTCGATCTCGGCGACGTAAAAGCGGGCGAGTTTGCCGAACCGATTTGTGAGCTGGAG
CTTGAGTTGCTTCGCGGCGATACGCGCGCCGTGTTAAAACTGGCGAAGCAACTGCTGTCGCAAACCGGTTTGCGTCAGGG
CAGTCTGAGTAAGGCGGCGCGAGGTTATCACCTGGCGCAGGGGAATGCGCCGCGAGAGAATACACCAACGACAATTCTGC
GGACCGCCGCGAAAGCCACGGTAGAGCAAGGGCTGGAGGCCTCGCTGGATCTGGCGTTGTCACAGTGGCAGTACCATGAA
GAGCTCTGGCTGCGCGGCGACAAGTCGGCGAAAGAACACGTGCTGGATGCTATGGGGTTGGTGCGCCATGCCTTAATGCT
CTTTGGTGGCATTGTTCCGCGTAAAGCGAGCGCTCACTTACGTGATCTACTTACCCAGGCGGAAGCGACGATGACATCCG
CGGTGTCCGCCGTCACAGCCGTTTATAGTACGCAAACGGCGATGGCGAAACTGGCATTGACGGAATGGCTGGTGACGAAA
GCCTGGCAGCCATTTCTGGACGCGAAGGCGCAGGCCAAAATGGCCGATTCTTTTAAGCGTTTCGCCGACATTCATCTTTC
TCGTCATGCTGCTGAATTAAAAAAAGTTTTTGGACAACCGCTGGGTGATAAATATCGCGACCAGTTGCCGCGTTTGACTC
GCGATATTGACAGCGTTTTACTGCTGGCCGGGTATTATGATGCGATGGTCGCGCAGGCATGGCTGGAGAACTGGCAGGGA
TTGCGTCACGCCATTATTACCGGGCAACGTATTGAAATTGAACATTTCCGTAATGAGGCCATCAACCAGCAGCCGTTCTG
GTTGCACAGCGGAAAACGATAA

Upstream 100 bases:

>100_bases
CATGGCAATTTGGCGCAAAATACTATCTACTGACAAAAATAATGCGGGTAAGTTCGCCAAGAATCTTCCCAGATGTGACA
TAACCCATAAGTACAAGGCC

Downstream 100 bases:

>100_bases
TCAGAACCGTAGAAAGCGCCTGATGACGCTGCGCTTATCAGGCTTACGGTATGCGGACTTGTAGGCCGGATCAGGCGAAA
CGCCGCCACCCGGCATTATT

Product: cytoplasmic protein

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MAQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGENGRYEMTMKIAGRVTGGLHQ
RPEYNVALSEPVLDLTQLPAEVWPDGNLPAGLASSVQPLFSTDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELE
LELLRGDTRAVLKLAKQLLSQTGLRQGSLSKAARGYHLAQGNAPRENTPTTILRTAAKATVEQGLEASLDLALSQWQYHE
ELWLRGDKSAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTAVYSTQTAMAKLALTEWLVTK
AWQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQPLGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQG
LRHAIITGQRIEIEHFRNEAINQQPFWLHSGKR

Sequences:

>Translated_433_residues
MAQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGENGRYEMTMKIAGRVTGGLHQ
RPEYNVALSEPVLDLTQLPAEVWPDGNLPAGLASSVQPLFSTDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELE
LELLRGDTRAVLKLAKQLLSQTGLRQGSLSKAARGYHLAQGNAPRENTPTTILRTAAKATVEQGLEASLDLALSQWQYHE
ELWLRGDKSAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTAVYSTQTAMAKLALTEWLVTK
AWQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQPLGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQG
LRHAIITGQRIEIEHFRNEAINQQPFWLHSGKR
>Mature_432_residues
AQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGENGRYEMTMKIAGRVTGGLHQR
PEYNVALSEPVLDLTQLPAEVWPDGNLPAGLASSVQPLFSTDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELEL
ELLRGDTRAVLKLAKQLLSQTGLRQGSLSKAARGYHLAQGNAPRENTPTTILRTAAKATVEQGLEASLDLALSQWQYHEE
LWLRGDKSAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTAVYSTQTAMAKLALTEWLVTKA
WQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQPLGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQGL
RHAIITGQRIEIEHFRNEAINQQPFWLHSGKR

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=433, Percent_Identity=85.4503464203233, Blast_Score=750, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 48555; Mature: 48424

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGE
CCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCHHHHHHCCCCEEEECC
NGRYEMTMKIAGRVTGGLHQRPEYNVALSEPVLDLTQLPAEVWPDGNLPAGLASSVQPLF
CCCEEEEEEEHHHHCCCCCCCCCCCEEECCCHHHHHHCCHHHCCCCCCCCCHHHHCCHHH
STDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELELELLRGDTRAVLKLAKQLLS
HCCHHHHCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QTGLRQGSLSKAARGYHLAQGNAPRENTPTTILRTAAKATVEQGLEASLDLALSQWQYHE
HCCCCCCCHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ELWLRGDKSAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYSTQTAMAKLALTEWLVTKAWQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQGLRHAIITGQRIEIEHFRNEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH
INQQPFWLHSGKR
CCCCCCEECCCCC
>Mature Secondary Structure 
AQEIELKFIVNHDAVDALRNHLHTLGGEHHAPSQLLNIYFETPDNWLRRHDMGLRIRGE
CCEEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCHHHHHHCCCCEEEECC
NGRYEMTMKIAGRVTGGLHQRPEYNVALSEPVLDLTQLPAEVWPDGNLPAGLASSVQPLF
CCCEEEEEEEHHHHCCCCCCCCCCCEEECCCHHHHHHCCHHHCCCCCCCCCHHHHCCHHH
STDFYREKWCLDVDGSRIEIALDLGDVKAGEFAEPICELELELLRGDTRAVLKLAKQLLS
HCCHHHHCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QTGLRQGSLSKAARGYHLAQGNAPRENTPTTILRTAAKATVEQGLEASLDLALSQWQYHE
HCCCCCCCHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ELWLRGDKSAKEHVLDAMGLVRHALMLFGGIVPRKASAHLRDLLTQAEATMTSAVSAVTA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYSTQTAMAKLALTEWLVTKAWQPFLDAKAQAKMADSFKRFADIHLSRHAAELKKVFGQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LGDKYRDQLPRLTRDIDSVLLLAGYYDAMVAQAWLENWQGLRHAIITGQRIEIEHFRNEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH
INQQPFWLHSGKR
CCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]