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The map label for this gene is 16766454

Identifier: 16766454

GI number: 16766454

Start: 3317048

End: 3317563

Strand: Reverse

Name: 16766454

Synonym: STM3154

Alternate gene names: NA

Gene position: 3317563-3317048 (Counterclockwise)

Preceding gene: 16766458

Following gene: 16766453

Centisome position: 68.3

GC content: 43.22

Gene sequence:

>516_bases
ATGGAGCCTGCTATGAACAGTATTTTTTATTCTGTTATTATATTGCTATTACTGACCGGCGCGATACTCTTCCTGATGTG
GGAGGTTAATAAAAAACGTCCTGGTGGAAAAATCGTAAATTTAAATCAAACTGAACCCATGACAAAGGAAGAGGGCGAAG
ATCATTTCTCAGTATTAATGAATTCGATAACGCCGGTATGGTACTGGCGCGTTAACCATGAATATATCGATTTCCTTCAT
GCAACGATAAAACGAATGACAATGACTGAGTTGAATGAAACGCCTGGATTATTTGACGCACAGCGTCGTTGCAGCGACCT
TAACTCTGCCGTTTATAAGTATTACGACAATATAAAGAAGCGTTGTCTGAACGGAGAAAAGGTGCCGTATTCGGATTTGG
ACGTCCTTAATTTACGCCAGTGTTTTCGCGAGTTCAGTCTTGAAGCCTACCCGGCATTGGTCGCGCTGGTATGGCCGGAA
TATCAGCGCCCGCAGGTTAACCCGGATGAGATTTAG

Upstream 100 bases:

>100_bases
AGGAAGCATGACTAAATATCCTTTACGATCAGTGGTATACTATTTTTAATAGTGTAGGTTTCGTTGACAATAACATGGCG
TAATTTTAAAATCAAAAAAA

Downstream 100 bases:

>100_bases
AGCCTATCCCATTAGGGCTATTTTACTTGCCATTTTGGACCTGGGCAGTGCTCGCCAAAACGCGTTAGCGTTTTGAACGC
CGCTAGCGGCGGCCCGAAGG

Product: ATP-dependent RNA helicase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MEPAMNSIFYSVIILLLLTGAILFLMWEVNKKRPGGKIVNLNQTEPMTKEEGEDHFSVLMNSITPVWYWRVNHEYIDFLH
ATIKRMTMTELNETPGLFDAQRRCSDLNSAVYKYYDNIKKRCLNGEKVPYSDLDVLNLRQCFREFSLEAYPALVALVWPE
YQRPQVNPDEI

Sequences:

>Translated_171_residues
MEPAMNSIFYSVIILLLLTGAILFLMWEVNKKRPGGKIVNLNQTEPMTKEEGEDHFSVLMNSITPVWYWRVNHEYIDFLH
ATIKRMTMTELNETPGLFDAQRRCSDLNSAVYKYYDNIKKRCLNGEKVPYSDLDVLNLRQCFREFSLEAYPALVALVWPE
YQRPQVNPDEI
>Mature_171_residues
MEPAMNSIFYSVIILLLLTGAILFLMWEVNKKRPGGKIVNLNQTEPMTKEEGEDHFSVLMNSITPVWYWRVNHEYIDFLH
ATIKRMTMTELNETPGLFDAQRRCSDLNSAVYKYYDNIKKRCLNGEKVPYSDLDVLNLRQCFREFSLEAYPALVALVWPE
YQRPQVNPDEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20057; Mature: 20057

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAMNSIFYSVIILLLLTGAILFLMWEVNKKRPGGKIVNLNQTEPMTKEEGEDHFSVLM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH
NSITPVWYWRVNHEYIDFLHATIKRMTMTELNETPGLFDAQRRCSDLNSAVYKYYDNIKK
HHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RCLNGEKVPYSDLDVLNLRQCFREFSLEAYPALVALVWPEYQRPQVNPDEI
HHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEPAMNSIFYSVIILLLLTGAILFLMWEVNKKRPGGKIVNLNQTEPMTKEEGEDHFSVLM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH
NSITPVWYWRVNHEYIDFLHATIKRMTMTELNETPGLFDAQRRCSDLNSAVYKYYDNIKK
HHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RCLNGEKVPYSDLDVLNLRQCFREFSLEAYPALVALVWPEYQRPQVNPDEI
HHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA