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The map label for this gene is tse [H]

Identifier: 16766452

GI number: 16766452

Start: 3314324

End: 3315967

Strand: Reverse

Name: tse [H]

Synonym: STM3152

Alternate gene names: 16766452

Gene position: 3315967-3314324 (Counterclockwise)

Preceding gene: 16766453

Following gene: 16766451

Centisome position: 68.27

GC content: 57.18

Gene sequence:

>1644_bases
ATGCGTTTGCTGCAAAACTTTACTATTCGTATGGTCATGCTGACGATACTGGGACTTTTTTGTCTACTCTGGTCGGGGGT
GGGGTTATACAGCGTCCATGCTTTATCCGAAGTTTCGGAAGGAAATGATATTGACCGGCATCTTGTGCGGCAAATGACGG
TGCTAAGCCAGGGTAACGATCAATATTTCCGCTTTGTTACCCGCCTTAGCCGCGCGATGGATGTAAAAATCGGCGGCGGC
ACGCCCGATTTTGCGCCCGCCCGGCAGTCGCTCGAGAATATGCGTCAGAAGCTGGAGGAGATGAAAGCGCTATCGCCAGG
GCCGATGAACCCTGATATCTCAAGGGAGGTCTTGTCCAACTGGCAGGCCTTGCTGGAGAAAGGCGTCGTTCCTCAAATGC
AACTGGCGCAGCAAGGATCGCTGACCGCCTGGAGCGAACATGCCAGTACGGTCACGCCCGCACTCAGTCGCGCGTTCGGC
GCCAGCGCGGAACGGTTTAGTCATGAAGCTGGCGCCATGCTGGATAACACACGTGTGATGGTCGATGGTAAAACCTATAC
CATCCGCATCCTGCTTATCACGGCGGTGATTCTGGGCATTGCTATCCTGATTTTTACCGATCGCTATCTGGTTGCAATGA
TGGTGAAACCGCTGGAGCGCATCCGTCAGCAGTTTCAGCGCATCGCGCAAGGCGATCTTAGCCAGCCGATTGAAGCGTTG
GGGCGTAACTGCGTAGGCCGGTTGGTGCCGCTACTACGCGCGATGCAGGACAGTTTACGCGAAGCCGTGAGTACGATCCG
CGCCGGAAGCGACAATATCTGGCGCGGCGCGACGGAAATTTCTACCGGTAATAACGATCTCTCTTCCCGAACGGAAGAAC
AGGCCGCCGCGCTGGAAGAAACTGCCGCCAGCATGGAACAGCTTACCGCAACGGTGAAAATGAACGCCGAACACGCTCGC
CAGGCGAGTCAGCTTGCGGATGCCGCCTCGCTAACGGCAGGAAAAGGCGGTGAACTGGTTTCCGATGTGGTAGAAACAAT
GAACGGTATTTCCGCCAGTTCGCAGCAGATCGCCGAAATTACTACCGTGATTAATAGTATTGCTTTCCAGACCAATATTC
TGGCCTTGAACGCAGCGGTAGAAGCGGCCAGAGCGGGCGAGCAGGGACGCGGCTTCGCGGTGGTCGCCGGTGAGGTACGT
AACCTGGCCAGCCGCAGCGCGGGGGCGGCGAAAGAAATTGAAGCCTTAATTGGCGAATCGGTACGTCGCGTAGCGCAGGG
CGCGCAGTTGGTCCAGGAGACCGGCGCGACGATGGACGCCATCCTGCGCGGCGTCACGGAAGTGACGACGATTATGAAAC
AGATCGCGTCCGCCTCCGAAGAACAGAGTAAAGGTATTTCTCAGGTTGGCGTGGCGATCACGCAAATGGATAGCGTTACG
CAACAAAACGCCGCGCTGGTTGAGCAGGTTTCCGCGGCGGCGGCGGCGCTGGAACGGCAGACGGAGGATTTGCAACGCTC
CGTACAGCAGTTCCGGCTTTCCGCTAGTGAGCCGCAACAACGCGTAACGGCGAAAGCGGCGCCTGGCGTTCAGAGAATGG
CGTCGGCTCCCGCACAGTCTACTGATGAATGGGTTTCCTTCTGA

Upstream 100 bases:

>100_bases
AAAAAATGGAGAATGCATTATATATTCTCCGCGCCTTGCCGATAACGAGAGTGCGTCATCGTCTGATGACTAATCTCTTA
TATTCAGCAAGGAAATTCAT

Downstream 100 bases:

>100_bases
TGTGAAGCAAAAAAGCGCGTAATGCGCTGGCCTTCATTTAATTAGTCGCTATATAATTTATTATATAGCGACTAAGGAGG
TCAGATGAATAATCATTTTG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGNDQYFRFVTRLSRAMDVKIGGG
TPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFG
ASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHAR
QASQLADAASLTAGKGGELVSDVVETMNGISASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAGAAKEIEALIGESVRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVT
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQSTDEWVSF

Sequences:

>Translated_547_residues
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGNDQYFRFVTRLSRAMDVKIGGG
TPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFG
ASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHAR
QASQLADAASLTAGKGGELVSDVVETMNGISASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAGAAKEIEALIGESVRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVT
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQSTDEWVSF
>Mature_547_residues
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGNDQYFRFVTRLSRAMDVKIGGG
TPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSNWQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFG
ASAERFSHEAGAMLDNTRVMVDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHAR
QASQLADAASLTAGKGGELVSDVVETMNGISASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVR
NLASRSAGAAKEIEALIGESVRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVT
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQSTDEWVSF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=424, Percent_Identity=50, Blast_Score=351, Evalue=8e-98,
Organism=Escherichia coli, GI2367378, Length=378, Percent_Identity=54.7619047619048, Blast_Score=328, Evalue=6e-91,
Organism=Escherichia coli, GI1788195, Length=339, Percent_Identity=56.3421828908555, Blast_Score=322, Evalue=3e-89,
Organism=Escherichia coli, GI1788194, Length=335, Percent_Identity=55.5223880597015, Blast_Score=319, Evalue=3e-88,
Organism=Escherichia coli, GI1789453, Length=324, Percent_Identity=38.2716049382716, Blast_Score=207, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58899; Mature: 58899

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50885 HAMP ; PS00538 CHEMOTAXIS_TRANSDUC_1 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGND
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
QYFRFVTRLSRAMDVKIGGGTPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSN
HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
WQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFGASAERFSHEAGAMLDNTRVM
HHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEE
VDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHH
TAASMEQLTATVKMNAEHARQASQLADAASLTAGKGGELVSDVVETMNGISASSQQIAEI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
TTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAGAAKEIEALIGES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHH
VRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCCC
TDEWVSF
CHHHHCC
>Mature Secondary Structure
MRLLQNFTIRMVMLTILGLFCLLWSGVGLYSVHALSEVSEGNDIDRHLVRQMTVLSQGND
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
QYFRFVTRLSRAMDVKIGGGTPDFAPARQSLENMRQKLEEMKALSPGPMNPDISREVLSN
HHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
WQALLEKGVVPQMQLAQQGSLTAWSEHASTVTPALSRAFGASAERFSHEAGAMLDNTRVM
HHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEE
VDGKTYTIRILLITAVILGIAILIFTDRYLVAMMVKPLERIRQQFQRIAQGDLSQPIEAL
ECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHH
TAASMEQLTATVKMNAEHARQASQLADAASLTAGKGGELVSDVVETMNGISASSQQIAEI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
TTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAGAAKEIEALIGES
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHH
VRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVT
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
QQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQQRVTAKAAPGVQRMASAPAQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCCC
TDEWVSF
CHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]