| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is nupG [H]
Identifier: 16766414
GI number: 16766414
Start: 3271455
End: 3272711
Strand: Direct
Name: nupG [H]
Synonym: STM3113
Alternate gene names: 16766414
Gene position: 3271455-3272711 (Clockwise)
Preceding gene: 16766413
Following gene: 16766416
Centisome position: 67.35
GC content: 51.47
Gene sequence:
>1257_bases ATGAATCTTAAGCTGCAGCTTAAAATACTCTCTTTTCTGCAGTTCTGTCTGTGGGGAAGCTGGCTCACTACCCTGGGCTC GTATATGTTCGTCACCTTAAAATTTGACGGCGCATCTATTGGCGCAGTTTATAGTTCACTGGGGATTGCCGCCGTCTTTA TGCCGACCTTGCTAGGCATTGTGGCTGACAAATGGCTGAGCGCGAAATGGGTCTATGCCCTGTGTCATGTCGTCGGCGCC ATCACGCTATTCATGGCCGCGGAAGTCACTACGCCTGGGGCGATGTTCTTTGTGATCCTGCTTAACTCGTTGGCCTATAT GCCGACGTTGGGCTTGATCAATACTATATCGTATTACCGCCTGCAGTCTGCCGGCATGGATATTGTGACTGACTTCCCGC CTATCCGTATCTGGGGCACCATTGGCTTTATTCTGGCGATGTGGGGCGTGAGTTTCTCCGGTTTCGAGCTGAGCCATATG CAGCTTTATATCGGCGCGACGCTTTCCGTTCTGCTGGTACTGTTTACCTTTACCCTGCCGCACATTCCGGTGGCGAACCA ACAGAAAAACCAGAGCTGGACATCAATGCTGGGCCTTGACGCTTTTGCGCTGTTTAAAAATAAGCGGATGGCGATTTTCT TCATCTTCTCCATGATGCTGGGCGCGGAACTGCAGATCACTAACATGTTTGGCAACACCTTCCTGCATAGCTTTGATAAA GATCCGCTATTCGCCAGTAGCTTTATCGTGCAGCACGCCTCGGTGATGATGTCGATTTCGCAGATTTCTGAAACGTTATT CATCCTGACCATTCCGTTCTTCCTGAGCCGCTATGGTATTAAGAACGTTATGCTTATCAGTATTGTGGCGTGGATGCTGC GTTTCGGCCTGTTCGCTTATGGCGACCCGACGCCGTTCGGTACCGTTCTGCTGGTACTGTCGATGATTGTGTACGGCTGC GCCTTCGACTTCTTCAACATTTCTGGCTCGGTGTTTGTCGAAAAAGAAGTACGCCCGGAAATCCGCGCCAGCGCGCAGGG GATGTTCCTGATGATGACCAATGGCTTCGGCTGTATCCTGGGCGGCATTGTGAGCGGTAAAGTGGTGGAGTATTACACTC AAAACGGCATTACCGACTGGCAGACCGTGTGGCTCATCTTCGCAGGCTACTCGCTGGTGCTGGCCTTCGCGTTCGTAGCC TTGTTCAAATACAAACACGTTCGCGTTCCGGCAAGTTCGCAACCCGTTGCACATTAA
Upstream 100 bases:
>100_bases ACAAAAAAAGCCCGCCTCTCATTGATAGAATCACACCAAATCACAACGGCAAATGTGCCTTTTAAAACATTCATCCGCTC TCAGGTGTGAGGAAATTAAC
Downstream 100 bases:
>100_bases TCCTTGCCCTGTTTCGCAGGCCGGATAAGGTGTAAATGCCTTATCCGGCCTGCAGGCAACGTTACTTTAAAACATATCCG TACAAGCGTTGAATTCCATC
Product: nucleoside transport
Products: NA
Alternate protein names: Nucleoside-transport system protein nupG [H]
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGIVADKWLSAKWVYALCHVVGA ITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYRLQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHM QLYIGATLSVLLVLFTFTLPHIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAYGDPTPFGTVLLVLSMIVYGC AFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCILGGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVA LFKYKHVRVPASSQPVAH
Sequences:
>Translated_418_residues MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGIVADKWLSAKWVYALCHVVGA ITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYRLQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHM QLYIGATLSVLLVLFTFTLPHIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAYGDPTPFGTVLLVLSMIVYGC AFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCILGGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVA LFKYKHVRVPASSQPVAH >Mature_418_residues MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGIVADKWLSAKWVYALCHVVGA ITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYRLQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHM QLYIGATLSVLLVLFTFTLPHIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAYGDPTPFGTVLLVLSMIVYGC AFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCILGGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVA LFKYKHVRVPASSQPVAH
Specific function: Transports nucleosides with a high affinity. Driven by a proton motive force [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli xapB and yegT [H]
Homologues:
Organism=Escherichia coli, GI87082192, Length=418, Percent_Identity=90.6698564593301, Blast_Score=762, Evalue=0.0, Organism=Escherichia coli, GI1788745, Length=418, Percent_Identity=59.5693779904306, Blast_Score=483, Evalue=1e-138, Organism=Escherichia coli, GI1788415, Length=425, Percent_Identity=30.8235294117647, Blast_Score=194, Evalue=1e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004740 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46498; Mature: 46498
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGI CCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH VADKWLSAKWVYALCHVVGAITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH LQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHMQLYIGATLSVLLVLFTFTLP HHHCCCCEEECCCCEEHHHHHHHHHHHHCCCCCCEEEEHHHEEHHHHHHHHHHHHHHHCC HIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCC DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEC GDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCIL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCEEEEEECCCHHHH GGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVALFKYKHVRVPASSQPVAH HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC >Mature Secondary Structure MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVYSSLGIAAVFMPTLLGI CCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH VADKWLSAKWVYALCHVVGAITLFMAAEVTTPGAMFFVILLNSLAYMPTLGLINTISYYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH LQSAGMDIVTDFPPIRIWGTIGFILAMWGVSFSGFELSHMQLYIGATLSVLLVLFTFTLP HHHCCCCEEECCCCEEHHHHHHHHHHHHCCCCCCEEEEHHHEEHHHHHHHHHHHHHHHCC HIPVANQQKNQSWTSMLGLDAFALFKNKRMAIFFIFSMMLGAELQITNMFGNTFLHSFDK CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCC DPLFASSFIVQHASVMMSISQISETLFILTIPFFLSRYGIKNVMLISIVAWMLRFGLFAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEC GDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVEKEVRPEIRASAQGMFLMMTNGFGCIL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCCCEEEEEECCCHHHH GGIVSGKVVEYYTQNGITDWQTVWLIFAGYSLVLAFAFVALFKYKHVRVPASSQPVAH HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3311747; 9278503 [H]