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The map label for this gene is fucU [H]

Identifier: 16766282

GI number: 16766282

Start: 3131516

End: 3131938

Strand: Direct

Name: fucU [H]

Synonym: STM2978

Alternate gene names: 16766282

Gene position: 3131516-3131938 (Clockwise)

Preceding gene: 16766281

Following gene: 16766283

Centisome position: 64.47

GC content: 54.37

Gene sequence:

>423_bases
ATGCTAAAAACCATTTCACCGTTAATTTCCCCGACACTGCTCAAAGTGCTGGCCGAGATGGGCCACGGGGACGAAATCAT
TTTTTCCGACGCTCACTTTCCCGCGCATAGCCTGGGCCCGCAGGTGATTCGCGCCGATGGTCTTAGCGTCAGCGATCTAC
TGCGGGCAATTATTCCGCTCTTTGAGCTGGATAGCTACGCCCCGCCGCTGGTGATGATGGCCGCCGTGGAAGGCGACACG
CTCGATCCCAACGTTGAAGCGCGCTATCGCGATGCCTTGTCATTAGAAGCGCCGTGCCCGGATATCGTTCGTATCGACCG
CTATGCGTTTTATGAGCGGGCGCAAAAAGCGTTTGCGATCGTTATCACAGGTGAGTGCGCGAAGTACGGAAATATTCTTT
TAAAAAAAGGGGTAACGCCGTAA

Upstream 100 bases:

>100_bases
GGCGAATTTAGTAGCCCGGAACAGGCGCGCGCGCAGGTCAATTATCAGTATCGTTATTTCTGGCCGCAAACCGAACCTGA
AATTATTGAGGGAGTATGAA

Downstream 100 bases:

>100_bases
TCTCTTGCCGGTGCGCCCGCATGACGCGGGCGTTCATCGAATGATGGGGTGAGAAAAATGAAAGCGGCACGCCAACAAGC
GATAGTCGATCTGCTGATCA

Product: L-fucose-binding protein

Products: NA

Alternate protein names: Fucose 1-epimerase; Type-2 mutarotase [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLKTISPLISPTLLKVLAEMGHGDEIIFSDAHFPAHSLGPQVIRADGLSVSDLLRAIIPLFELDSYAPPLVMMAAVEGDT
LDPNVEARYRDALSLEAPCPDIVRIDRYAFYERAQKAFAIVITGECAKYGNILLKKGVTP

Sequences:

>Translated_140_residues
MLKTISPLISPTLLKVLAEMGHGDEIIFSDAHFPAHSLGPQVIRADGLSVSDLLRAIIPLFELDSYAPPLVMMAAVEGDT
LDPNVEARYRDALSLEAPCPDIVRIDRYAFYERAQKAFAIVITGECAKYGNILLKKGVTP
>Mature_140_residues
MLKTISPLISPTLLKVLAEMGHGDEIIFSDAHFPAHSLGPQVIRADGLSVSDLLRAIIPLFELDSYAPPLVMMAAVEGDT
LDPNVEARYRDALSLEAPCPDIVRIDRYAFYERAQKAFAIVITGECAKYGNILLKKGVTP

Specific function: Involved in the anomeric conversion of L-fucose [H]

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbsD / fucU family. FucU mutarotase subfamily [H]

Homologues:

Organism=Homo sapiens, GI148596947, Length=144, Percent_Identity=46.5277777777778, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI148596951, Length=130, Percent_Identity=44.6153846153846, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI1789169, Length=140, Percent_Identity=91.4285714285714, Blast_Score=262, Evalue=8e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007721 [H]

Pfam domain/function: PF05025 RbsD_FucU [H]

EC number: NA

Molecular weight: Translated: 15281; Mature: 15281

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTISPLISPTLLKVLAEMGHGDEIIFSDAHFPAHSLGPQVIRADGLSVSDLLRAIIPL
CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
FELDSYAPPLVMMAAVEGDTLDPNVEARYRDALSLEAPCPDIVRIDRYAFYERAQKAFAI
HHCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCEEEE
VITGECAKYGNILLKKGVTP
EEECCCHHHCCCCEECCCCC
>Mature Secondary Structure
MLKTISPLISPTLLKVLAEMGHGDEIIFSDAHFPAHSLGPQVIRADGLSVSDLLRAIIPL
CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHH
FELDSYAPPLVMMAAVEGDTLDPNVEARYRDALSLEAPCPDIVRIDRYAFYERAQKAFAI
HHCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCEEEE
VITGECAKYGNILLKKGVTP
EEECCCHHHCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA