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The map label for this gene is pad1 [H]

Identifier: 16766227

GI number: 16766227

Start: 3063182

End: 3063775

Strand: Direct

Name: pad1 [H]

Synonym: STM2921

Alternate gene names: 16766227

Gene position: 3063182-3063775 (Clockwise)

Preceding gene: 16766225

Following gene: 16766228

Centisome position: 63.06

GC content: 57.74

Gene sequence:

>594_bases
ATGAGATTGATTGTGGGGATGACCGGTGCGACCGGCGCGCCGCTTGGCGTCGAGCTACTCCAGGCATTGCGGGCGATACC
TGATGTTGAAACGCATCTGGTAATGTCAAAGTGGGCGAAAACCACTATTGAACTGGAGACGCCCTACACGCCCGCTGAGG
TAGCCGCCCTGGCAGATTATTGTCATAGCCCGGCCGATCAGGCGGCGACCATTTCCTCCGGCTCATTTCGTACCGACGGC
ATGATTATTATCCCCTGCAGTATGAAAACACTGGCGGGGGTTCGCGCCGGCTATGCCGAGGGGCTGGTGGGACGCGCTGC
CGATGTCGTGTTGAAAGAGGGTCGCAAGCTGGTGCTTGTGCCGCGGGAAATGCCGCTCAGCACGATTCATCTGGAAAACA
TGCTTGCGCTTTCTCGTATGGGGGTGGCGATAGTGCCGCCCATGCCCGCGTTCTACAACCTGCCGCAAACCGTTGACGAT
ATTATCCAGCACATCGTAGCGCGCGTTCTCGACCAGTTTGGTCTGGAGCATACGCGCACGCGCCGCTGGCAAGGACTGCG
ACAGACAGCAAATTTTTCACAGGAGAATGGATAA

Upstream 100 bases:

>100_bases
AGCTAAACGTGCGCAGGCGTCGGGAGCGATCTTGTCGCAAAGGCCGTGTGGGCGTATTTTGATCAAAATGTTCGTATACG
AACGATATTTGAGGTAAGAA

Downstream 100 bases:

>100_bases
TGGCATTTGATGATTTGCGCAGTTTTTTACATGCGCTGGATCAGCAGGGACAACTGCTGAAAATCAGCGAGGAAGTGAAT
GCGGAGCCGGATCTCGCAGC

Product: flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADYCHSPADQAATISSGSFRTDG
MIIIPCSMKTLAGVRAGYAEGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDD
IIQHIVARVLDQFGLEHTRTRRWQGLRQTANFSQENG

Sequences:

>Translated_197_residues
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADYCHSPADQAATISSGSFRTDG
MIIIPCSMKTLAGVRAGYAEGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDD
IIQHIVARVLDQFGLEHTRTRRWQGLRQTANFSQENG
>Mature_197_residues
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADYCHSPADQAATISSGSFRTDG
MIIIPCSMKTLAGVRAGYAEGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDD
IIQHIVARVLDQFGLEHTRTRRWQGLRQTANFSQENG

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=55.9139784946236, Blast_Score=201, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=54.0106951871658, Blast_Score=214, Evalue=8e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21404; Mature: 21404

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADY
CEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHH
CHSPADQAATISSGSFRTDGMIIIPCSMKTLAGVRAGYAEGLVGRAADVVLKEGRKLVLV
HCCCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDDIIQHIVARVLDQFGLEHTRT
CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
RRWQGLRQTANFSQENG
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADY
CEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHH
CHSPADQAATISSGSFRTDGMIIIPCSMKTLAGVRAGYAEGLVGRAADVVLKEGRKLVLV
HCCCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDDIIQHIVARVLDQFGLEHTRT
CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
RRWQGLRQTANFSQENG
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]