| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is slrB [H]
Identifier: 16766140
GI number: 16766140
Start: 2979851
End: 2980213
Strand: Direct
Name: slrB [H]
Synonym: STM2834
Alternate gene names: 16766140
Gene position: 2979851-2980213 (Clockwise)
Preceding gene: 16766139
Following gene: 16766141
Centisome position: 61.35
GC content: 57.58
Gene sequence:
>363_bases ATGAGCGTGATTTATCAAACCACCATCACCCGTATCGGCCAGAGCGCGAAGGAAGCGCTCGGCGAACAGATGCTGATTAC GTTTCGGGAAGGCGCGCCGGCGGATATCGAAGAATTTTGCTTCATCCATTGTCATGGCGAACTGACCGGCGCGCTGCAGC CTGGCGCGCGGTGTGAATTGGGTCAACATTGCTATCCGGTCACGGCGGTCGGCAGCGTAGCCGAGCAAAACCTGCGTGAA CTGGGGCATATCACTTTGCGCTTCGATGGTCTGCGTGAAGCGGAATTTCCCGGCACCGTACACGTTGCGGGGCCTGTACC GGACGATATCGCGCCGGGCTGTATTTTGACGTTTGTCGCTTAA
Upstream 100 bases:
>100_bases GCGTACCTTCTGTGCTGGTCGGACGCTTCCTGACTGGCGCGCCCACGGTACTTATCGCCTGGTTTGTTTCCGGCTTTATC TATCAATAAGAGGTTCAGAC
Downstream 100 bases:
>100_bases GGAGAAAAAACATGAATCAAGTTGCCGTTGTCATTGGCGGAGGCCAGACCCTGGGGGCATTCCTTTGCCGTGGGCTTGCA GAAGAAGGATACCGCGTGGC
Product: PTS system glucitol/sorbitol-specific transporter subunit IIA
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Gut; EIII-Gut; PTS system glucitol/sorbitol-specific EIIA component [H]
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSVIYQTTITRIGQSAKEALGEQMLITFREGAPADIEEFCFIHCHGELTGALQPGARCELGQHCYPVTAVGSVAEQNLRE LGHITLRFDGLREAEFPGTVHVAGPVPDDIAPGCILTFVA
Sequences:
>Translated_120_residues MSVIYQTTITRIGQSAKEALGEQMLITFREGAPADIEEFCFIHCHGELTGALQPGARCELGQHCYPVTAVGSVAEQNLRE LGHITLRFDGLREAEFPGTVHVAGPVPDDIAPGCILTFVA >Mature_119_residues SVIYQTTITRIGQSAKEALGEQMLITFREGAPADIEEFCFIHCHGELTGALQPGARCELGQHCYPVTAVGSVAEQNLREL GHITLRFDGLREAEFPGTVHVAGPVPDDIAPGCILTFVA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3731
COG function: function code G; Phosphotransferase system sorbitol-specific component IIA
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-5 domain [H]
Homologues:
Organism=Escherichia coli, GI1789056, Length=118, Percent_Identity=82.2033898305085, Blast_Score=204, Evalue=9e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004716 - InterPro: IPR018454 - ProDom: PD015842 [H]
Pfam domain/function: PF03829 PTSIIA_gutA [H]
EC number: 2.7.1.69
Molecular weight: Translated: 12909; Mature: 12778
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS51097 PTS_EIIA_TYPE_5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIYQTTITRIGQSAKEALGEQMLITFREGAPADIEEFCFIHCHGELTGALQPGARCEL CCEEHHHHHHHHCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCEEECCCCCCCCCC GQHCYPVTAVGSVAEQNLRELGHITLRFDGLREAEFPGTVHVAGPVPDDIAPGCILTFVA CCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECC >Mature Secondary Structure SVIYQTTITRIGQSAKEALGEQMLITFREGAPADIEEFCFIHCHGELTGALQPGARCEL CEEHHHHHHHHCHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCEEECCCCCCCCCC GQHCYPVTAVGSVAEQNLRELGHITLRFDGLREAEFPGTVHVAGPVPDDIAPGCILTFVA CCCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferases; Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3553176; 1630305; 9205837; 9278503 [H]