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The map label for this gene is ydaV [H]

Identifier: 16765945

GI number: 16765945

Start: 2767108

End: 2767857

Strand: Reverse

Name: ydaV [H]

Synonym: STM2625

Alternate gene names: 16765945

Gene position: 2767857-2767108 (Counterclockwise)

Preceding gene: 16765946

Following gene: 16765944

Centisome position: 56.98

GC content: 52.53

Gene sequence:

>750_bases
ATGAAAAACGTAATCGGTACTGGCAGTGCGCTTGATCGCCTGAAAAGAATTATCCCAGCCAGTGTGCAGCCGAAATTCTC
GACTGCTGATGAGTGGCGGGCATGGCAGGAAGCCGAAGGGCGTAAACGCAGTGAAGAGCTTGACAGGATGAATCAGAAAT
CCCGCACCGAGAAGATTTTCGGGCGATCTGGCATTCAGGATCTCCATCGTAGCTGTACGTTTGCTAACTACGAAGTAAGC
GGGGAGGGGCAGCGAAAAGCGTACACGATGGCAAAAAGTTATGCCCAGAACTTCGGTAGTGGATTTGCGAGCTTTGTGTT
CAGCGGTGGTCCGGGAACCGGGAAAAACCATCTTGCGGCGGCAATCGGAAATCATCTGCTGGCCGGCGGTCATAGCGTTC
TGGTGGTAACTATTCCTGACCTGATGCTCAGGGTTCGTGAGTGCTACGACGGTGGGCAATCAGAAGCGTCCCTGCTTGAT
GACCTTTGTAAAGTTGACCTGCTGGTACTGGATGAAGTCGGTATTCAGCGCGGAAGCAGTGGTGAGAAGGTCATTCTCAA
TCAGGTTATCGATCGCCGTCTCTCATCGATGCGACCTGTTGGCGTTCTGACGAATCTTAACCACGAGGGGCTGTTGGATT
CACTGGGCGCGAGGGTTATCGATCGCCTCCAGATGGACGGAGGGATGTGGGTGAATTTTGACTGGGAAAGCTACCGGAAA
AACGTTAGCCACCTCCGGATTGTGAAATAA

Upstream 100 bases:

>100_bases
TCAAACCGAAGTTCGCTCTCAACGACCGAAGAGCTGGCAGAGATGTGAACCACATTTCTGCGCCAGACAAAACCATTCCT
ACCGGATTCAGGGGGTAACG

Downstream 100 bases:

>100_bases
GGGGTTAAAAATGGCCCGACCTAAAACACAAAGCGAACGGATGATTATTCTTGAGCGGATTATCGGTCTGGTGAAAGAGC
AGGGGCGCATCACGACGAAC

Product: replication protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVS
GEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLD
DLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRK
NVSHLRIVK

Sequences:

>Translated_249_residues
MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVS
GEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLD
DLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRK
NVSHLRIVK
>Mature_249_residues
MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIFGRSGIQDLHRSCTFANYEVS
GEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLD
DLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRK
NVSHLRIVK

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787623, Length=249, Percent_Identity=55.421686746988, Blast_Score=292, Evalue=1e-80,
Organism=Escherichia coli, GI1790823, Length=244, Percent_Identity=48.7704918032787, Blast_Score=251, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 27569; Mature: 27569

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIF
CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAA
HHCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHEECCCCCCCHHHHHH
AIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSS
HHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRK
CCCHHHHHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHC
NVSHLRIVK
CHHHEEECC
>Mature Secondary Structure
MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRMNQKSRTEKIF
CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGSGFASFVFSGGPGTGKNHLAA
HHCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCHHHHHEECCCCCCCHHHHHH
AIGNHLLAGGHSVLVVTIPDLMLRVRECYDGGQSEASLLDDLCKVDLLVLDEVGIQRGSS
HHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GEKVILNQVIDRRLSSMRPVGVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRK
CCCHHHHHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHC
NVSHLRIVK
CHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]