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The map label for this gene is arrD [H]

Identifier: 16765933

GI number: 16765933

Start: 2759427

End: 2759879

Strand: Reverse

Name: arrD [H]

Synonym: STM2612

Alternate gene names: 16765933

Gene position: 2759879-2759427 (Counterclockwise)

Preceding gene: 16765934

Following gene: 39546345

Centisome position: 56.82

GC content: 52.76

Gene sequence:

>453_bases
ATGATGAGAATCAGTGAAAAAGGCATTACCCTAATCAAAGAGTTTGAAGGTTGTAGCCTGAAAGCTTATCCGGACCCGGG
AACGGGGGGAGATCCCTGGACGATTGGTTATGGCTGGACCCACTCTGTTGACGGTAAGCCAGTTAAGCCCGGAATGATGA
TTGACGAGGCTACTGCCGAGCGCTTGCTTAAAACTGGTTTAGTCGGTTATGAAAATGATGTGTCCAGACTGGTTAAGGTC
AAGTTGACGCAAGGCCAGTTTGATGCGCTGGTGTCGTTCGCGTACAACCTCGGCGCCCGGACATTATCCACATCAACTCT
GCTGCGGAAGCTAAACGCTGGTGATTACGCTGGCGCCGCTGATGAGTTCCTGCGCTGGAATAAGGCTGGTAGCAAGGTAC
TGAACGGGCTTACCCGTCGGCGTGAGGCGGAGCGTGCTCTGTTCCTGTCATGA

Upstream 100 bases:

>100_bases
GTTTCCATTTCGCCTTTCGTTGGCGGAATTATTGGCTTTGTCGGTGTGGACAAGCTGCGCGAAATCGCAATTAGCGCACT
CAAAAAACGTGCAGGGGTTA

Downstream 100 bases:

>100_bases
TGTTCAACTGGAAAACGATGTTTGTTGGCCTGTTGCTCGTCTCGCTAATTGTTGCCGGTCGGCTGGCAAATCACTACCGC
AATAACGCTATCACTTACAA

Product: morphogenesis-like protein

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKV
KLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS

Sequences:

>Translated_150_residues
MMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKV
KLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS
>Mature_150_residues
MMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAERLLKTGLVGYENDVSRLVKV
KLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAADEFLRWNKAGSKVLNGLTRRREAERALFLS

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=117, Percent_Identity=40.1709401709402, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 16446; Mature: 16446

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAE
CCEECCCCCEEEECCCCCEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCCEECHHHHH
RLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAA
HHHHHCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
DEFLRWNKAGSKVLNGLTRRREAERALFLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRISEKGITLIKEFEGCSLKAYPDPGTGGDPWTIGYGWTHSVDGKPVKPGMMIDEATAE
CCEECCCCCEEEECCCCCEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCCEECHHHHH
RLLKTGLVGYENDVSRLVKVKLTQGQFDALVSFAYNLGARTLSTSTLLRKLNAGDYAGAA
HHHHHCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
DEFLRWNKAGSKVLNGLTRRREAERALFLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]