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The map label for this gene is 16765922

Identifier: 16765922

GI number: 16765922

Start: 2750082

End: 2750465

Strand: Reverse

Name: 16765922

Synonym: STM2601

Alternate gene names: NA

Gene position: 2750465-2750082 (Counterclockwise)

Preceding gene: 16765923

Following gene: 16765921

Centisome position: 56.62

GC content: 56.51

Gene sequence:

>384_bases
ATGTCGCAGTCCGAAAACCTGTTTGATACCGCGATTTCTCAGGCTGATGATGCCATCCTCCGGGTGATGGGAACGGTAGC
AACAATAACCTCCGGCGTTCTGGCAGGGGCCACGCTTACGGGCGTATTTGACGATCCTGAAAGTGTGTCGTATGCCGCCG
GAGGTGTCCGGATTGAGGGAGACAAGCCTACATTTTTTGTCAAAACATCCCTGACAGTCCATCTGAAGCGCCCGGACACA
CTAACCATTCTCGGTGACACCTTCTGGGTGGATCGCATCACTCCGGCTGGTGGAGACAGCAGTATTATTCTGCTGGGCAG
GGGGACGCCGCCGACGGATAACCGGCGCAGGACGGGAGGAATGTTTGACTGCTCCCCGGCCTAA

Upstream 100 bases:

>100_bases
CTGGATATGGTTATGGCGGGAAACCCGGCGCGTATTTCGCAACACGATGTGGACGAGCTGATTGCTGCAGGACTTATTAT
TGAACTGTAAGGGTGGCGAT

Downstream 100 bases:

>100_bases
AGGCCGGGGTTTCCCGGAGGCATTCTGATGAAAGGGCTTGAAAATGCGATCCGGAATCTGAACAGCCTTGACCGACAGAT
GGTTCCCCGGGCCAGTATCT

Product: minor capsid protein FII

Products: NA

Alternate protein names: Gifsy-1 Prophage Minor Capsid Protein FII; Minor Capsid Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDT
LTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA

Sequences:

>Translated_127_residues
MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDT
LTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA
>Mature_126_residues
SQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEGDKPTFFVKTSLTVHLKRPDTL
TILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGGMFDCSPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13378; Mature: 13247

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEEEECCCCCCCEEECCCEEEEC
DKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGG
CCCEEEEEEEEEEEEECCCEEEEEECEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
MFDCSPA
EEECCCC
>Mature Secondary Structure 
SQSENLFDTAISQADDAILRVMGTVATITSGVLAGATLTGVFDDPESVSYAAGGVRIEG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCEEEEECCCCCCCEEECCCEEEEC
DKPTFFVKTSLTVHLKRPDTLTILGDTFWVDRITPAGGDSSIILLGRGTPPTDNRRRTGG
CCCEEEEEEEEEEEEECCCEEEEEECEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
MFDCSPA
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA