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The map label for this gene is gogB

Identifier: 16765904

GI number: 16765904

Start: 2728976

End: 2730469

Strand: Direct

Name: gogB

Synonym: STM2584

Alternate gene names: NA

Gene position: 2728976-2730469 (Clockwise)

Preceding gene: 16765896

Following gene: 16765905

Centisome position: 56.18

GC content: 32.93

Gene sequence:

>1494_bases
TTGACATATAGATTGAAAAAGCGCATGAAAATAGGATTCCAACCAGCCATATTGCAATATGCATATACAAGTAACGAGGC
GACATCAAACCTTGAGTTATTAAATAAATGGAGAATAGAATCCCCAGATATTGAGAAGGAGGAGCGTAATAGTATTTACG
ACAAAATAATAGAAGCAAATCATACCGGGAGCTTATCAATTACTGCTCATCATGTTACCTCTATTCCGGTATTTCCTGAT
AATTTATCCGAATTGAATTTATCTTCATGCTATACACTGGAGTCTATTCCAAATCTTCCTGATGGGTTAAAAAGTTTAAC
TATATCTGGAAATCAGACCATTAAAATTTCATATTTCCCAGATAGCTTAGAGTCACTATCTATAGATATGCAGGCATATG
AAGAAAATTATACTTTCCCCGCATTACCTTATGGATTAAAGAGTTTTACTGCATGCTATGGTAAATTTTTGCCTCCCCTT
CCTCCGCATCTATCTTCTTTGTCATTGCAAAATTTCTCTGAAATATTATGTGCTGAGTTACCATATAAATTAGATAAATT
AGATTTACAAAATTGCCCTTTCTTGCCATTAATGAAAATGTTACCTGAGGAGTTAAAAGAACTAAGTATTGAACTTATAC
GAACAGTTCCCGGTACTGTTATAGATGATATTTTGCCTGATAAGCTAAAAAAATTAAGTATCAACTTTTGTGATAATATT
AAACTTCCAGTTAAGCTTCCTGTTAATTTAAAGTCTATCAATTTATCCTCAAGGACCCCTATTGCATGGGAAATACCAAC
CTGCAATCTGCCTGCACATATAGATATTAGTACCGATGGTTATGTTAAGCTTAATCCTGAATTTCTTACCAGGAGTGATA
TTACCTTTAGTAACAAACCTGCAGGAGATGTGTTAAGTTTTCAGCCTGGAGATGTGGTTTATGGTTTATGTAAGGCAAGA
GATCGAGTAAATACTTTAGTTAATTCGTTATATTATTTTTCAAAAAAAGATATTATTATTCAAAATACATTAACAGATGC
GGTCTGGGACAGGAAGAATAGAGCCGTGTTTAATAAAGATGAGAAGATAGCAGAAAGATTGAATGATGTTCAGAGAGGGA
TTTTTTTTAGAGAATTTTTATCTCAACATAAAAAATACAATATTACCGAAGATAAATATTCAGACTTATCCAATGAGGAG
TGCTGGATAAAAACAAGTAAAGCCGGTCTTGAATTTCAAACACGATTGAGGGAACGGTCAGTTATTTTTGTCATTGACAA
TTTAGTTGATGCTATAAGTGATATCGCAAATAAAACAGGAAAGCATGGTAATTCTATTACAGCACATGAGCTAAGATGGG
TATATCGGAATCGACATGATGATCTGGTAAAACAAAATGTTAAATTTTTTCTTAATGGTGAGGCTATTTCACACGAAGAT
GTTTTTTCATTAGTTGGTTGGGATAAATATAAGCCTAAAAATAGAAATCGTTGA

Upstream 100 bases:

>100_bases
CATGTTGCTGAATCGGCTAACAGCTTCTTAAACGATCGGTATTAGGCTAGGTTCTAAATCTTGCCTGAATGAAAATAAAT
GTAATAATGATAGCTTGGTA

Downstream 100 bases:

>100_bases
CTTTAAAAAAATATGCAATTAATATATTTATATATAGAGCAGCCCTATTGGAGTTAAGGATATATACTCCCCCTAACTCT
AGACTACATGCCAACTTTAC

Product: leucine-rich repeat-containing protein

Products: NA

Alternate protein names: C Component Of Insecticidal xin Complex; T3SS Secreted Effector EspK-Homolog

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPD
NLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPL
PPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNI
KLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKAR
DRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEE
CWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHED
VFSLVGWDKYKPKNRNR

Sequences:

>Translated_497_residues
MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPD
NLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPL
PPHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNI
KLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKAR
DRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEE
CWIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHED
VFSLVGWDKYKPKNRNR
>Mature_496_residues
TYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEANHTGSLSITAHHVTSIPVFPDN
LSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFPDSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLP
PHLSSLSLQNFSEILCAELPYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNIK
LPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKPAGDVLSFQPGDVVYGLCKARD
RVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKDEKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEEC
WIKTSKAGLEFQTRLRERSVIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHEDV
FSLVGWDKYKPKNRNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56944; Mature: 56813

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEAN
CCCCCCHHHHCCCCHHHEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
HTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFP
CCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEHHHCCCCCCCHHEEEECCCCEEEEEECC
DSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAEL
CCHHHHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHC
PYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCC
KLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKP
CCCEEECCEEEEECCCCCCCEEEECCCCCCCEEEEECCCCEEEECHHHCCCCCCCCCCCC
AGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCC
EKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHCC
VIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHED
EEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCEEEECCCCCCHHH
VFSLVGWDKYKPKNRNR
HHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TYRLKKRMKIGFQPAILQYAYTSNEATSNLELLNKWRIESPDIEKEERNSIYDKIIEAN
CCCCCHHHHCCCCHHHEEEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
HTGSLSITAHHVTSIPVFPDNLSELNLSSCYTLESIPNLPDGLKSLTISGNQTIKISYFP
CCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEHHHCCCCCCCHHEEEECCCCEEEEEECC
DSLESLSIDMQAYEENYTFPALPYGLKSFTACYGKFLPPLPPHLSSLSLQNFSEILCAEL
CCHHHHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHC
PYKLDKLDLQNCPFLPLMKMLPEELKELSIELIRTVPGTVIDDILPDKLKKLSINFCDNI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCC
KLPVKLPVNLKSINLSSRTPIAWEIPTCNLPAHIDISTDGYVKLNPEFLTRSDITFSNKP
CCCEEECCEEEEECCCCCCCEEEECCCCCCCEEEEECCCCEEEECHHHCCCCCCCCCCCC
AGDVLSFQPGDVVYGLCKARDRVNTLVNSLYYFSKKDIIIQNTLTDAVWDRKNRAVFNKD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCCC
EKIAERLNDVQRGIFFREFLSQHKKYNITEDKYSDLSNEECWIKTSKAGLEFQTRLRERS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHCC
VIFVIDNLVDAISDIANKTGKHGNSITAHELRWVYRNRHDDLVKQNVKFFLNGEAISHED
EEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCEEEECCCCCCHHH
VFSLVGWDKYKPKNRNR
HHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA