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The map label for this gene is insF1 [H]

Identifier: 16765829

GI number: 16765829

Start: 2622292

End: 2622648

Strand: Reverse

Name: insF1 [H]

Synonym: STM2509

Alternate gene names: 16765829

Gene position: 2622648-2622292 (Counterclockwise)

Preceding gene: 16765830

Following gene: 16765825

Centisome position: 53.99

GC content: 47.34

Gene sequence:

>357_bases
TTGTATCTTGCCGTGGTCGTTGATTTGTTCTCGTGCAAAGTTATCGGTTGGTCAATGCAACCACGAATGACAAAAGATAT
TGTTCTGAATGCGCTTCTGATGGCCGTGTGGCGACGTCATCCCCAAAAACAGGTGCTGGTTCAGTCTGATCAGGGTAGTC
AGTACACCCGCTATGAATGGCTGAAATTGCACGGACTGGAGGGCAGTATGAGCCGTTGTGGCAACTGTCATGACAATGCG
GTTGCAGAAAGCTTTTTCCAGCTACTGAAGCGTGAACGGATAAAGAAAAAGATCTACCAACGACTCAGAAGTGTCCAGGT
TATCCGTGGCGATTCAGCCCAAATAAGGGGTATTTAA

Upstream 100 bases:

>100_bases
TTTTACAGAGGGTTTTTATTTATGTGCATTCATGAATTTTCTATGTGGCGCACAGTTCCTGACGGCAAATTTGACGTAAT
TACGAACCCACGAAGGTTGG

Downstream 100 bases:

>100_bases
AATATAGTAACTTTATTCTTCAACTATATAACCAACGCCCAGCTTTAGCACTTTCAACGAGCATACCAACCGTTAGTGGC
TTACGCGGATCAGGCTCTTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MYLAVVVDLFSCKVIGWSMQPRMTKDIVLNALLMAVWRRHPQKQVLVQSDQGSQYTRYEWLKLHGLEGSMSRCGNCHDNA
VAESFFQLLKRERIKKKIYQRLRSVQVIRGDSAQIRGI

Sequences:

>Translated_118_residues
MYLAVVVDLFSCKVIGWSMQPRMTKDIVLNALLMAVWRRHPQKQVLVQSDQGSQYTRYEWLKLHGLEGSMSRCGNCHDNA
VAESFFQLLKRERIKKKIYQRLRSVQVIRGDSAQIRGI
>Mature_118_residues
MYLAVVVDLFSCKVIGWSMQPRMTKDIVLNALLMAVWRRHPQKQVLVQSDQGSQYTRYEWLKLHGLEGSMSRCGNCHDNA
VAESFFQLLKRERIKKKIYQRLRSVQVIRGDSAQIRGI

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=98, Percent_Identity=37.7551020408163, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1788405, Length=97, Percent_Identity=53.6082474226804, Blast_Score=100, Evalue=2e-23,
Organism=Escherichia coli, GI1787263, Length=97, Percent_Identity=53.6082474226804, Blast_Score=100, Evalue=2e-23,
Organism=Escherichia coli, GI1786753, Length=97, Percent_Identity=53.6082474226804, Blast_Score=100, Evalue=2e-23,
Organism=Escherichia coli, GI1786570, Length=97, Percent_Identity=53.6082474226804, Blast_Score=100, Evalue=2e-23,
Organism=Escherichia coli, GI1786490, Length=97, Percent_Identity=53.6082474226804, Blast_Score=100, Evalue=2e-23,
Organism=Escherichia coli, GI1789981, Length=95, Percent_Identity=46.3157894736842, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 13753; Mature: 13753

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLAVVVDLFSCKVIGWSMQPRMTKDIVLNALLMAVWRRHPQKQVLVQSDQGSQYTRYEW
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHH
LKLHGLEGSMSRCGNCHDNAVAESFFQLLKRERIKKKIYQRLRSVQVIRGDSAQIRGI
HHEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MYLAVVVDLFSCKVIGWSMQPRMTKDIVLNALLMAVWRRHPQKQVLVQSDQGSQYTRYEW
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHH
LKLHGLEGSMSRCGNCHDNAVAESFFQLLKRERIKKKIYQRLRSVQVIRGDSAQIRGI
HHEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]