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The map label for this gene is perM [H]

Identifier: 16765813

GI number: 16765813

Start: 2606696

End: 2607763

Strand: Reverse

Name: perM [H]

Synonym: STM2493

Alternate gene names: 16765813

Gene position: 2607763-2606696 (Counterclockwise)

Preceding gene: 16765816

Following gene: 16765812

Centisome position: 53.69

GC content: 54.96

Gene sequence:

>1068_bases
ATGCTCGAAATGTTAATGCAATGGTATCGCCGTCGCTTCAGCGACCCGGAGGCGATTGCCTTGCTGGTCATTCTGGTGGC
TGGTTTTAGCATCCTCTTTTTCTTTAGCGGCCTGTTAGCGCCGCTGCTGGTCGCTATCGTACTGGCCTACCTGCTGGAGT
GGCCGACGGCGCGCCTGCAGGCGATTGGCTGTTCCCGGCGCTGGGCAGCCTCCATTGTCCTTATCCTTTTTGTCGGCATT
CTGTTATTAATGGCGTTTGTGGTGATGCCGATTGCCTGGCAGCAGGGTATTTACCTGATTCGTGATATGCCCGGTATGCT
GAATAAACTGTCCGATTTCGCCGCGACCTTGCCGCGACGCTATCCGGCGCTGATGGATGCGGGCATTATTGATGCGATGG
CGGAAAACATGCGTACCCGGATGCTTAACATGGGCGATTCGGTGGTGAAGTATTCGCTGGCTTCGTTAGTCGGGCTACTG
ACGCTGGCGGTATATCTGGTGCTGGTGCCGCTGATGGTCTTTTTCCTGGTAAAAGATAAAGAGCAGATGCTGAATGCCGT
GCGCCGCGTGCTGCCGCGTAATCGCGGGCTGGCGGGGCAGGTGTGGAATGAGATGAATCAGCAGATCACCAACTATATCC
GCGGAAAAGTGCTGGAGATGGTGGTGGTGGGCGTAGCGACCTGGCTGGGTTTTTTGCTGTTTGGCCTCAACTATTCGCTA
CTGCTGGCGGTACTGGTGGGCTTTTCGGTTCTGATCCCCTATATCGGCGCCTTTGTGGTGACAATTCCGGTGGTGGGCGT
CGCGCTGTTTCAGTTTGGTCTGGGGACGGAATTCTGGAGCTGTTTTGCCGTTTATCTCATTATTCAGGCGCTGGATGGCA
ATTTGCTGGTACCGGTACTTTTCTCCGAAGCGGTGAATTTGCATCCGCTGGTGATTATTCTGTCAGTGGTGATTTTCGGC
GGTCTGTGGGGTTTCTGGGGGGTGTTTTTCGCCATTCCATTGGCGACGCTGATTAAAGCCGTTGTCCATGCCTGGCCGGA
TGGTCAGGTGACGGATGCCTCATCCTGA

Upstream 100 bases:

>100_bases
TTTAGTTTCCTGAATCAACGATAAAAAGCGAAGTCTTTTTTGTGACATTTCGATACAATTCGGCATCACAATCCCGCAGT
TGAGTTCTGGGAAGGGTTTT

Downstream 100 bases:

>100_bases
GCGGTCAGTACAAAAGTTGTAAAGCGTGAACGACATCATAGTGCCCTGCCGCCATTTTGCGCACGCCTGATGAGGGACAA
GCGCTTAGAAAGCCGCTCTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MLEMLMQWYRRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQAIGCSRRWAASIVLILFVGI
LLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLL
TLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVVHAWPDGQVTDASS

Sequences:

>Translated_355_residues
MLEMLMQWYRRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQAIGCSRRWAASIVLILFVGI
LLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLL
TLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVVHAWPDGQVTDASS
>Mature_355_residues
MLEMLMQWYRRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQAIGCSRRWAASIVLILFVGI
LLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLL
TLAVYLVLVPLMVFFLVKDKEQMLNAVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFG
GLWGFWGVFFAIPLATLIKAVVHAWPDGQVTDASS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=352, Percent_Identity=94.0340909090909, Blast_Score=662, Evalue=0.0,
Organism=Escherichia coli, GI87082271, Length=205, Percent_Identity=26.8292682926829, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39365; Mature: 39365

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEMLMQWYRRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQ
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AIGCSRRWAASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
YPALMDAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLVKDK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQMLNAVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHH
FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDGQVTDASS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLEMLMQWYRRRFSDPEAIALLVILVAGFSILFFFSGLLAPLLVAIVLAYLLEWPTARLQ
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AIGCSRRWAASIVLILFVGILLLMAFVVMPIAWQQGIYLIRDMPGMLNKLSDFAATLPRR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHH
YPALMDAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLVKDK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
EQMLNAVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAVYLIIQALDGNLLVPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHH
FSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVVHAWPDGQVTDASS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]