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The map label for this gene is purC [H]

Identifier: 16765807

GI number: 16765807

Start: 2602104

End: 2602817

Strand: Reverse

Name: purC [H]

Synonym: STM2487

Alternate gene names: 16765807

Gene position: 2602817-2602104 (Counterclockwise)

Preceding gene: 16765808

Following gene: 16765806

Centisome position: 53.58

GC content: 52.24

Gene sequence:

>714_bases
ATGCAAAAGCAAGCTGAGTTGTATCGTGGTAAAGCGAAAACCGTATACAGCACGGAAAACCCGGACCTGTTGGTGCTCGA
ATTCCGCAATGATACGTCAGCAGGGGATGGCGCGCGCATTGAACAGTTTGATCGCAAGGGCATGGTAAATAACAAATTCA
ACCATTTCATTATGACCAAACTGGCCGAGGCGGGCATCCCGACCCAGATGGAACGTTTGCTGTCTGATACCGAGTGTCTG
GTGAAGAAGCTGGAGATGGTGCCGGTTGAATGTGTGGTGCGCAACCGTGCGGCTGGGTCGCTGGTCAAGCGTCTGGGCGT
GGAAGAAGGCATGGAGCTTAACCCGCCGATATTCGATCTGTTCCTGAAAAACGACGCGCTGCACGACCCGATGGTGAATA
GTTCCTACTGTGAAACGTTCGGTTGGGTAAGTCAGGAAAATCTGGCGCGTATGAAAGAGCTAACCTACAAAGCCAACGAC
GTACTGAAAAAACTGTTTGATGACGCGGGTCTTATCCTGGTGGATTTCAAACTGGAGTTTGGCCTGTATAAAGGCGAAGT
GGTGCTGGGCGATGAGTTTTCGCCGGACGGTAGCCGCCTGTGGGATAAAGAGACGCTGGACAAAATGGACAAAGACCGCT
TCCGCCAGAGCCTGGGCGGTCTGATTGAAGCCTATGAAGCCGTCGCGCATCGCCTGGGCGTGAAATTAGATTAA

Upstream 100 bases:

>100_bases
ATTTAACCGCTATTTCGCACCACAATTACAGGCCGGCGTCTCCGGCAGGCGTAGCAGGAAATGAATACTTATCGTTAATT
CACACCCAGGAGTGTTAAAG

Downstream 100 bases:

>100_bases
TTCCGCTTCTGACCGGGGGGCAACCGCTCTCCGGTATCATCCTTTCCTCATTCTGATAGCGTTTACCTGTGGTAATCCTG
CGCCTGACCGCCTACGATCA

Product: phosphoribosylaminoimidazole-succinocarboxamide synthase

Products: NA

Alternate protein names: SAICAR synthetase [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMTKLAEAGIPTQMERLLSDTECL
VKKLEMVPVECVVRNRAAGSLVKRLGVEEGMELNPPIFDLFLKNDALHDPMVNSSYCETFGWVSQENLARMKELTYKAND
VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSLGGLIEAYEAVAHRLGVKLD

Sequences:

>Translated_237_residues
MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMTKLAEAGIPTQMERLLSDTECL
VKKLEMVPVECVVRNRAAGSLVKRLGVEEGMELNPPIFDLFLKNDALHDPMVNSSYCETFGWVSQENLARMKELTYKAND
VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSLGGLIEAYEAVAHRLGVKLD
>Mature_237_residues
MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMTKLAEAGIPTQMERLLSDTECL
VKKLEMVPVECVVRNRAAGSLVKRLGVEEGMELNPPIFDLFLKNDALHDPMVNSSYCETFGWVSQENLARMKELTYKAND
VLKKLFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSLGGLIEAYEAVAHRLGVKLD

Specific function: De novo purine biosynthesis; seventh step. [C]

COG id: COG0152

COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SAICAR synthetase family [H]

Homologues:

Organism=Homo sapiens, GI119220557, Length=245, Percent_Identity=31.8367346938775, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI5453539, Length=245, Percent_Identity=31.8367346938775, Blast_Score=115, Evalue=4e-26,
Organism=Homo sapiens, GI119220559, Length=252, Percent_Identity=30.5555555555556, Blast_Score=105, Evalue=4e-23,
Organism=Escherichia coli, GI1788820, Length=237, Percent_Identity=94.9367088607595, Blast_Score=468, Evalue=1e-133,
Organism=Caenorhabditis elegans, GI17531275, Length=219, Percent_Identity=28.310502283105, Blast_Score=90, Evalue=9e-19,
Organism=Drosophila melanogaster, GI18860083, Length=221, Percent_Identity=33.0316742081448, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24583917, Length=204, Percent_Identity=30.3921568627451, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013816
- InterPro:   IPR001636
- InterPro:   IPR018236 [H]

Pfam domain/function: PF01259 SAICAR_synt [H]

EC number: =6.3.2.6 [H]

Molecular weight: Translated: 26908; Mature: 26908

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01057 SAICAR_SYNTHETASE_1 ; PS01058 SAICAR_SYNTHETASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMTK
CCCHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
LAEAGIPTQMERLLSDTECLVKKLEMVPVECVVRNRAAGSLVKRLGVEEGMELNPPIFDL
HHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHCCCCCCCCCEEE
FLKNDALHDPMVNSSYCETFGWVSQENLARMKELTYKANDVLKKLFDDAGLILVDFKLEF
EECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
GLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSLGGLIEAYEAVAHRLGVKLD
CEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNHFIMTK
CCCHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHH
LAEAGIPTQMERLLSDTECLVKKLEMVPVECVVRNRAAGSLVKRLGVEEGMELNPPIFDL
HHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHCCCCCCCCCEEE
FLKNDALHDPMVNSSYCETFGWVSQENLARMKELTYKANDVLKKLFDDAGLILVDFKLEF
EECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
GLYKGEVVLGDEFSPDGSRLWDKETLDKMDKDRFRQSLGGLIEAYEAVAHRLGVKLD
CEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA